[HTML][HTML] Emerging priorities for microbiome research

CM Cullen, KK Aneja, S Beyhan, CE Cho… - Frontiers in …, 2020 - frontiersin.org
Microbiome research has increased dramatically in recent years, driven by advances in
technology and significant reductions in the cost of analysis. Such research has unlocked a …

Inferring microbiota functions from taxonomic genes: a review

C Djemiel, PA Maron, S Terrat, S Dequiedt… - …, 2022 - academic.oup.com
Deciphering microbiota functions is crucial to predict ecosystem sustainability in response to
global change. High-throughput sequencing at the individual or community level has …

Citizen-science reveals changes in the oral microbiome in Spain through age and lifestyle factors

JR Willis, E Saus, S Iraola-Guzmán… - npj Biofilms and …, 2022 - nature.com
The relevance of the human oral microbiome to our understanding of human health has
grown in recent years as microbiome studies continue to develop. Given the links of the oral …

Microbiome profiling from fecal immunochemical test reveals microbial signatures with potential for colorectal cancer screening

O Khannous-Lleiffe, JR Willis, E Saus, V Moreno… - Cancers, 2022 - mdpi.com
Simple Summary Colorectal cancer (CRC) is a global healthcare challenge that involves
both genetic and environmental factors. Several pieces of evidence suggest that alterations …

Measurement techniques to resolve and control population dynamics of mixed-culture processes

I Schlembach, A Grünberger, MA Rosenbaum… - Trends in …, 2021 - cell.com
Microbial mixed cultures are gaining increasing attention as biotechnological production
systems, since they offer a large but untapped potential for future bioprocesses. Effects of …

Namco: a microbiome explorer

A Dietrich, MS Matchado, M Zwiebel… - Microbial …, 2022 - microbiologyresearch.org
16S rRNA gene profiling is currently the most widely used technique in microbiome research
and allows the study of microbial diversity, taxonomic profiling, phylogenetics, functional and …

Gastrointestinal microbiome disruption and antibiotic-associated diarrhea in children receiving antibiotic therapy for community-acquired pneumonia

J Kwon, Y Kong, M Wade, DJ Williams… - The Journal of …, 2022 - academic.oup.com
Antibiotic-associated diarrhea (AAD) is a common side effect of antibiotics. We examined the
gastrointestinal microbiota in children treated with β-lactams for community-acquired …

Effects of initial combinations of gemigliptin plus metformin compared with glimepiride plus metformin on gut microbiota and glucose regulation in obese patients with …

S Lim, M Sohn, JC Florez, MA Nauck, J Ahn - Nutrients, 2023 - mdpi.com
The efficacy and safety of medications can be affected by alterations in gut microbiota in
human beings. Among antidiabetic medications, incretin-based therapy such as dipeptidyl …

Agricultural fast food: bats feeding in banana monocultures are heavier but have less diverse gut microbiota

P Alpízar, A Risely, M Tschapka… - Frontiers in Ecology and …, 2021 - frontiersin.org
Habitat alteration for agriculture can negatively affect wildlife physiology and health by
decreasing diet diversity and increasing exposure to agrochemicals for animals foraging in …

A topic modeling approach reveals the dynamic T cell composition of peripheral blood during cancer immunotherapy

X Peng, J Lee, M Adamow, C Maher, MA Postow… - Cell Reports …, 2023 - cell.com
We present TopicFlow, a computational framework for flow cytometry data analysis of patient
blood samples for the identification of functional and dynamic topics in circulating T cell …