Identification of neoantigens for individualized therapeutic cancer vaccines

F Lang, B Schrörs, M Löwer, Ö Türeci… - Nature reviews Drug …, 2022 - nature.com
Somatic mutations in cancer cells can generate tumour-specific neoepitopes, which are
recognized by autologous T cells in the host. As neoepitopes are not subject to central …

Organoids in cancer research

J Drost, H Clevers - Nature Reviews Cancer, 2018 - nature.com
The recent advances in in vitro 3D culture technologies, such as organoids, have opened
new avenues for the development of novel, more physiological human cancer models. Such …

[HTML][HTML] Comprehensive characterization of cancer driver genes and mutations

MH Bailey, C Tokheim, E Porta-Pardo, S Sengupta… - Cell, 2018 - cell.com
Identifying molecular cancer drivers is critical for precision oncology. Multiple advanced
algorithms to identify drivers now exist, but systematic attempts to combine and optimize …

Mutational heterogeneity in cancer and the search for new cancer-associated genes

MS Lawrence, P Stojanov, P Polak, GV Kryukov… - Nature, 2013 - nature.com
Major international projects are underway that are aimed at creating a comprehensive
catalogue of all the genes responsible for the initiation and progression of cancer …

Towards personalized, tumour-specific, therapeutic vaccines for cancer

Z Hu, PA Ott, CJ Wu - Nature Reviews Immunology, 2018 - nature.com
Cancer vaccines, which are designed to amplify tumour-specific T cell responses through
active immunization, have long been envisioned as a key tool of effective cancer …

NF‐κB signaling in inflammation and cancer

T Zhang, C Ma, Z Zhang, H Zhang, H Hu - MedComm, 2021 - Wiley Online Library
Since nuclear factor of κ‐light chain of enhancer‐activated B cells (NF‐κB) was discovered
in 1986, extraordinary efforts have been made to understand the function and regulating …

[HTML][HTML] Comprehensive analysis of alternative splicing across tumors from 8,705 patients

A Kahles, KV Lehmann, NC Toussaint, M Hüser… - Cancer cell, 2018 - cell.com
Our comprehensive analysis of alternative splicing across 32 The Cancer Genome Atlas
cancer types from 8,705 patients detects alternative splicing events and tumor variants by …

Somatic CALR Mutations in Myeloproliferative Neoplasms with Nonmutated JAK2

J Nangalia, CE Massie, EJ Baxter… - … England Journal of …, 2013 - Mass Medical Soc
Background Somatic mutations in the Janus kinase 2 gene (JAK2) occur in many
myeloproliferative neoplasms, but the molecular pathogenesis of myeloproliferative …

GISTIC2. 0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers

CH Mermel, SE Schumacher, B Hill, ML Meyerson… - Genome biology, 2011 - Springer
We describe methods with enhanced power and specificity to identify genes targeted by
somatic copy-number alterations (SCNAs) that drive cancer growth. By separating SCNA …

Integrative genomic profiling of human prostate cancer

BS Taylor, N Schultz, H Hieronymus, A Gopalan… - Cancer cell, 2010 - cell.com
Annotation of prostate cancer genomes provides a foundation for discoveries that can
impact disease understanding and treatment. Concordant assessment of DNA copy number …