Benchmarking the performance of irregular computations in AutoDock-GPU molecular docking

L Solis-Vasquez, AF Tillack, D Santos-Martins, A Koch… - Parallel computing, 2022 - Elsevier
Irregular applications can be found in different scientific fields. In computer-aided drug
design, molecular docking simulations play an important role in finding promising drug …

GPU-accelerated flexible molecular docking

M Fan, J Wang, H Jiang, Y Feng… - The Journal of …, 2021 - ACS Publications
Virtual screening is a key enabler of computational drug discovery and requires accurate
and efficient structure-based molecular docking. In this work, we develop algorithms and …

Empowering Real-Time IoT Applications: A Brief Review on Leveraging GPU Acceleration for Latency Reduction

AS Haichour, K Benfriha - IFIP International Internet of Things Conference, 2024 - Springer
The rapid increase in the number of IoT (Internet of Things) devices and the consequent
surge in data transmission pose significant challenges to real-time data processing and …

Network-based pharmacology study reveals protein targets for medical benefits and harms of cannabinoids in humans

X Li, A Madhukar Kudke, F Joseph Nepveux V, Y Xu - Applied Sciences, 2022 - mdpi.com
This network-based pharmacology study intends to uncover the underlying mechanisms of
cannabis leading to a therapeutic benefit and the pathogenesis for a wide range of diseases …

[HTML][HTML] Accelerating molecular docking by parallelized heterogeneous computing-a case study of performance, quality of results, and energy-efficiency using CPUs …

L Solis Vasquez - 2019 - tuprints.ulb.tu-darmstadt.de
Molecular Docking (MD) is a key tool in computer-aided drug design that aims to predict the
binding pose between a small molecule and a macromolecular target. At its core, MD …

Razvoj novih tioureidnih derivata naproksena: sinteza, fizičko-hemijska i biološka karakterizacija

N Nedeljković - Универзитет у Крагујевцу, 2024 - nardus.mpn.gov.rs
Uvod: Funkcionalizacijom karboksilne grupe naproksena u tioureidnu grupu primenom
sterno voluminoznih i lipofilnih aromatičnih amina i estara aromatičnih aminokiselina mogu …

A novel parallel Markov clustering method in biological interaction network analysis under multi-GPU computing environment

Y Fu, W Zhou - The Journal of Supercomputing, 2020 - Springer
The various clustering methods are widely applied in analyzing biological interaction
networks, such as the protein–protein interaction and the genetic interaction networks. With …

Desarrollo, optimización y autooptimización de algoritmos paralelos para análisis cinemático de sistemas multicuerpo basado en ecuaciones de grupo

JC Cano Lorente - Proyecto de investigación:, 2021 - digitum.um.es
El modelado es la disciplina que permite analizar y simular el comportamiento de un
determinado sistema mediante una representación numérica de sus propiedades. Entre sus …

[Цитат][C] توسعه یک استراتژی داکینگ مولکولی کارآمد برای پیش بینی نحوه برهمکنش ترکیبات مهارکننده COX-2 با جایگاه اتصال آنزیم

شمسیان‎ - دانشگاه علوم پزشکی تبریز، دانشکده …

[Цитат][C] Development of an efficient molecular docking strategy for the prediction of interaction of COX-2 inhibitors with binding site of enzyme

S Shamsian - 2022 - Tabriz University of Medical …