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Polarizable embedding QM/MM: the future gold standard for complex (bio) systems?
Nowadays, hybrid QM/MM approaches are widely used to study (supra) molecular systems
embedded in complex biological matrices. However, in their common formulation, mutual …
embedded in complex biological matrices. However, in their common formulation, mutual …
Time-resolved infrared spectroscopy in the study of photosynthetic systems
Abstract Time-resolved (TR) infrared (IR) spectroscopy in the nanosecond to second
timescale has been extensively used, in the last 30 years, in the study of photosynthetic …
timescale has been extensively used, in the last 30 years, in the study of photosynthetic …
The unique photophysical properties of the Peridinin-Chlorophyll-a-Protein
Peridinin-Chlorophyll-a-Proteins (PCPs) are water-soluble light harvesting complexes from
dinoflagellates. They have unique light-harvesting and energy transfer properties which …
dinoflagellates. They have unique light-harvesting and energy transfer properties which …
Vibrational circular dichroism from ab initio molecular dynamics and nuclear velocity perturbation theory in the liquid phase
We report the first fully ab initio calculation of dynamical vibrational circular dichroism
spectra in the liquid phase using nuclear velocity perturbation theory (NVPT) derived …
spectra in the liquid phase using nuclear velocity perturbation theory (NVPT) derived …
Classical force fields tailored for QM applications: Is it really a feasible strategy?
Classical molecular dynamics is more and more often coupled to quantum mechanical
based techniques as a statistical tool to sample configurations of molecular systems …
based techniques as a statistical tool to sample configurations of molecular systems …
The nature of the intramolecular charge transfer state in peridinin
Experimental and theoretical evidence is presented that supports the theory that the
intramolecular charge transfer (ICT) state of peridinin is an evolved state formed via excited …
intramolecular charge transfer (ICT) state of peridinin is an evolved state formed via excited …
[HTML][HTML] Echinenone vibrational properties: from solvents to the orange carotenoid protein
Orange carotenoid protein (OCP) is a cyanobacterial photoactive protein which binds
echinenone as a chromophore; it is involved in photoprotection of these photosynthetic …
echinenone as a chromophore; it is involved in photoprotection of these photosynthetic …
Vibrational signature of water molecules in asymmetric hydrogen bonding environments
The O–H stretching vibrational modes of water molecules are sensitive to their local
environments. Here, we applied effective normal-mode analysis to isolate contributions of …
environments. Here, we applied effective normal-mode analysis to isolate contributions of …
Combining classical molecular dynamics and quantum mechanical methods for the description of electronic excitations: the case of carotenoids
Carotenoids are important actors both in light‐harvesting (LH) and in photoprotection
functions of photosynthetic pigment–protein complexes. A deep theoretical investigation of …
functions of photosynthetic pigment–protein complexes. A deep theoretical investigation of …
Dynamics of the special pair of chlorophylls of photosystem II
Cholophylls are at the basis of the photosynthetic energy conversion mechanisms in algae,
plants, and cyanobacteria. In photosystem II, the photoproduced electrons leave a special …
plants, and cyanobacteria. In photosystem II, the photoproduced electrons leave a special …