Multimodal machine learning in precision health: A sco** review

A Kline, H Wang, Y Li, S Dennis, M Hutch, Z Xu… - npj Digital …, 2022 - nature.com
Abstract Machine learning is frequently being leveraged to tackle problems in the health
sector including utilization for clinical decision-support. Its use has historically been focused …

Machine learning: its challenges and opportunities in plant system biology

M Hesami, M Alizadeh, AMP Jones… - Applied Microbiology and …, 2022 - Springer
Sequencing technologies are evolving at a rapid pace, enabling the generation of massive
amounts of data in multiple dimensions (eg, genomics, epigenomics, transcriptomic …

Improving protein-protein interactions prediction accuracy using XGBoost feature selection and stacked ensemble classifier

C Chen, Q Zhang, B Yu, Z Yu, PJ Lawrence… - Computers in biology …, 2020 - Elsevier
Protein-protein interactions (PPIs) are involved with most cellular activities at the proteomic
level, making the study of PPIs necessary to comprehending any biological process …

Prediction and analysis of train arrival delay based on XGBoost and Bayesian optimization

R Shi, X Xu, J Li, Y Li - Applied Soft Computing, 2021 - Elsevier
Accurate train arrival delay prediction is critical for real-time train dispatching and for the
improvement of the transportation service. This study proposes a data-driven method that …

Early prediction of diabetes using an ensemble of machine learning models

A Dutta, MK Hasan, M Ahmad, MA Awal… - International Journal of …, 2022 - mdpi.com
Diabetes is one of the most rapidly spreading diseases in the world, resulting in an array of
significant complications, including cardiovascular disease, kidney failure, diabetic …

LightGBM-PPI: Predicting protein-protein interactions through LightGBM with multi-information fusion

C Chen, Q Zhang, Q Ma, B Yu - Chemometrics and Intelligent Laboratory …, 2019 - Elsevier
Protein-protein interactions (PPIs) play an important role in cell life activities such as
transcriptional regulation, signal transduction and drug signal transduction. The study of …

Computational prediction and interpretation of cell-specific replication origin sites from multiple eukaryotes by exploiting stacking framework

L Wei, W He, A Malik, R Su, L Cui… - Briefings in …, 2021 - academic.oup.com
Origins of replication sites (ORIs), which refers to the initiative locations of genomic DNA
replication, play essential roles in DNA replication process. Detection of ORIs' distribution in …

SDNN-PPI: self-attention with deep neural network effect on protein-protein interaction prediction

X Li, P Han, G Wang, W Chen, S Wang, T Song - BMC genomics, 2022 - Springer
Abstract Background Protein-protein interactions (PPIs) dominate intracellular molecules to
perform a series of tasks such as transcriptional regulation, information transduction, and …

MARPPI: boosting prediction of protein–protein interactions with multi-scale architecture residual network

X Li, P Han, W Chen, C Gao, S Wang… - Briefings in …, 2023 - academic.oup.com
Protein–protein interactions (PPIs) are a major component of the cellular biochemical
reaction network. Rich sequence information and machine learning techniques reduce the …

iEnhancer-5Step: identifying enhancers using hidden information of DNA sequences via Chou's 5-step rule and word embedding

NQK Le, EKY Yapp, QT Ho, N Nagasundaram… - Analytical …, 2019 - Elsevier
An enhancer is a short (50–1500bp) region of DNA that plays an important role in gene
expression and the production of RNA and proteins. Genetic variation in enhancers has …