Predicting unobserved phenotypes for complex traits from whole-genome SNP data
Genome-wide association studies (GWAS) for quantitative traits and disease in humans and
other species have shown that there are many loci that contribute to the observed …
other species have shown that there are many loci that contribute to the observed …
Using the realized relationship matrix to disentangle confounding factors for the estimation of genetic variance components of complex traits
Background In the analysis of complex traits, genetic effects can be confounded with non-
genetic effects, especially when using full-sib families. Dominance and epistatic effects are …
genetic effects, especially when using full-sib families. Dominance and epistatic effects are …
Bayesian map** of quantitative trait loci for multiple complex traits with the use of variance components
Complex traits important for humans are often correlated phenotypically and genetically.
Joint map** of quantitative-trait loci (QTLs) for multiple correlated traits plays an important …
Joint map** of quantitative-trait loci (QTLs) for multiple correlated traits plays an important …
An application of Bayesian QTL map** to early development in double haploid lines of rainbow trout including environmental effects
V Martinez, G Thorgaard, B Robison… - Genetics …, 2005 - cambridge.org
A Bayesian model and variable dimensional parameter estimation based on Markov chain
Monte Carlo was applied to map quantitative trait loci (QTLs) in a doubled haploid map** …
Monte Carlo was applied to map quantitative trait loci (QTLs) in a doubled haploid map** …
Simultaneous fine map** of multiple closely linked quantitative trait loci using combined linkage disequilibrium and linkage with a general pedigree
Within a small region (eg.,< 10 cM), there can be multiple quantitative trait loci (QTL)
underlying phenotypes of a trait. Simultaneous fine map** of closely linked QTL needs an …
underlying phenotypes of a trait. Simultaneous fine map** of closely linked QTL needs an …
Signal decompositions using trans-dimensional Bayesian methods.
A Roodaki - 2012 - theses.hal.science
This thesis addresses the challenges encountered when dealing with signal decomposition
problems with an unknown number of components in a Bayesian framework. Particularly, we …
problems with an unknown number of components in a Bayesian framework. Particularly, we …
Bayesian QTL map** for multiple families derived from crossing a set of inbred lines to a reference line
T Hayashi, H Iwata - Heredity, 2009 - nature.com
In some crop species, germplasm collections consisting of a large number of accessions that
include traditional landraces, modern cultivars and wild species have recently been …
include traditional landraces, modern cultivars and wild species have recently been …
A Bayesian method for simultaneously detecting Mendelian and imprinted quantitative trait loci in experimental crosses of outbred species
T Hayashi, T Awata - Genetics, 2008 - academic.oup.com
Genomic imprinting is interpreted as a phenomenon, in which some genes inherited from
one parent are not completely expressed due to modification of the genome caused during …
one parent are not completely expressed due to modification of the genome caused during …
Note on the computation of the Metropolis-Hastings ratio for Birth-or-Death moves in trans-dimensional MCMC algorithms for signal decomposition problems
A Roodaki, J Bect, G Fleury - ar** for recombinant inbred lines derived from a four-way cross
T Hayashi, A Ohyama, H Iwata - Euphytica, 2012 - Springer
Recombinant inbred lines (RILs) are created by a cross between inbred lines followed by
repeated selfing or sib-mating, which include many different types of new inbred lines with …
repeated selfing or sib-mating, which include many different types of new inbred lines with …