Near-infrared fluorescent proteins, biosensors, and optogenetic tools engineered from phytochromes

KG Chernov, TA Redchuk, ES Omelina… - Chemical …, 2017 - ACS Publications
Phytochrome photoreceptors absorb far-red and near-infrared (NIR) light and regulate light
responses in plants, fungi, and bacteria. Their multidomain structure and autocatalytic …

Diatom molecular research comes of age: model species for studying phytoplankton biology and diversity

A Falciatore, M Jaubert, JP Bouly, B Bailleul… - The Plant …, 2020 - academic.oup.com
Diatoms are the world's most diverse group of algae, comprising at least 100,000 species.
Contributing~ 20% of annual global carbon fixation, they underpin major aquatic food webs …

Ecological effects of artificial light at night on wild plants

J Bennie, TW Davies, D Cruse, KJ Gaston - Journal of Ecology, 2016 - Wiley Online Library
Plants use light as a source of both energy and information. Plant physiological responses to
light, and interactions between plants and animals (such as herbivory and pollination), have …

Engineering RGB color vision into Escherichia coli

J Fernandez-Rodriguez, F Moser, M Song… - Nature chemical …, 2017 - nature.com
Optogenetic tools use colored light to rapidly control gene expression in space and time. We
designed a genetically encoded system that gives Escherichia coli the ability to distinguish …

Phytochromes: an atomic perspective on photoactivation and signaling

ES Burgie, RD Vierstra - The Plant Cell, 2014 - academic.oup.com
The superfamily of phytochrome (Phy) photoreceptors regulates a wide array of light
responses in plants and microorganisms through their unique ability to reversibly switch …

Diverse light responses of cyanobacteria mediated by phytochrome superfamily photoreceptors

LB Wiltbank, DM Kehoe - Nature Reviews Microbiology, 2019 - nature.com
Cyanobacteria are an evolutionarily and ecologically important group of prokaryotes. They
exist in diverse habitats, ranging from hot springs and deserts to glaciers and the open …

Phytochrome diversity in green plants and the origin of canonical plant phytochromes

FW Li, M Melkonian, CJ Rothfels, JC Villarreal… - Nature …, 2015 - nature.com
Phytochromes are red/far-red photoreceptors that play essential roles in diverse plant
morphogenetic and physiological responses to light. Despite their functional significance …

Natural photoreceptors as a source of fluorescent proteins, biosensors, and optogenetic tools

DM Shcherbakova, AA Shemetov… - Annual review of …, 2015 - annualreviews.org
Genetically encoded optical tools have revolutionized modern biology by allowing detection
and control of biological processes with exceptional spatiotemporal precision and sensitivity …

Engineering AraC to make it responsive to light instead of arabinose

E Romano, A Baumschlager, EB Akmeric… - Nature chemical …, 2021 - nature.com
The l-arabinose-responsive AraC and its cognate PBAD promoter underlie one of the most
often used chemically inducible prokaryotic gene expression systems in microbiology and …

Crystal structure of Deinococcus phytochrome in the photoactivated state reveals a cascade of structural rearrangements during photoconversion

ES Burgie, J Zhang, RD Vierstra - Structure, 2016 - cell.com
Phytochromes are photochromic photoreceptors responsible for a myriad of red/far-red light-
dependent processes in plants and microorganisms. Interconversion is initially driven by …