Predicting future from past: The genomic basis of recurrent and rapid stickleback evolution

GA Roberts Kingman, DN Vyas, FC Jones… - Science …, 2021 - science.org
Similar forms often evolve repeatedly in nature, raising long-standing questions about the
underlying mechanisms. Here, we use repeated evolution in stickleback to identify a large …

Assembly of the threespine stickleback Y chromosome reveals convergent signatures of sex chromosome evolution

CL Peichel, SR McCann, JA Ross, AFS Naftaly… - Genome biology, 2020 - Springer
Background Heteromorphic sex chromosomes have evolved repeatedly across diverse
species. Suppression of recombination between X and Y chromosomes leads to …

A key metabolic gene for recurrent freshwater colonization and radiation in fishes

A Ishikawa, N Kabeya, K Ikeya, R Kakioka, JN Cech… - Science, 2019 - science.org
Colonization of new ecological niches has triggered large adaptive radiations. Although
some lineages have made use of such opportunities, not all do so. The factors causing this …

Construction of Ultradense Linkage Maps with Lep-MAP2: Stickleback F 2 Recombinant Crosses as an Example

P Rastas, FCF Calboli, B Guo… - Genome biology and …, 2016 - academic.oup.com
High-density linkage maps are important tools for genome biology and evolutionary genetics
by quantifying the extent of recombination, linkage disequilibrium, and chromosomal …

[PDF][PDF] Utility of transcriptome sequencing for phylogenetic inference and character evolution

J Wen, AN Egan, RB Dikow… - … -generation sequencing in …, 2015 - repository.si.edu
Transcriptome sequencing or RNA-Seq is one of the most efficient and cost-effective
methods currently available for gene discovery in non-model organisms. Recent studies …

The genomic landscape at a late stage of stickleback speciation: high genomic divergence interspersed by small localized regions of introgression

M Ravinet, K Yoshida, S Shigenobu, A Toyoda… - PLoS …, 2018 - journals.plos.org
Speciation is a continuous process and analysis of species pairs at different stages of
divergence provides insight into how it unfolds. Previous genomic studies on young species …

Population genomic evidence for adaptive differentiation in the Baltic Sea herring

B Guo, Z Li, J Merilä - Molecular ecology, 2016 - Wiley Online Library
Detecting and estimating the degree of genetic differentiation among populations of highly
mobile marine fish having pelagic larval stages is challenging because their effective …

Multispecies outcomes of sympatric speciation after admixture with the source population in two radiations of Nicaraguan crater lake cichlids

AF Kautt, G Machado-Schiaffino, A Meyer - PLoS genetics, 2016 - journals.plos.org
The formation of species in the absence of geographic barriers (ie sympatric speciation)
remains one of the most controversial topics in evolutionary biology. While theoretical …

[HTML][HTML] Worldwide phylogeny of three-spined sticklebacks

B Fang, J Merilä, F Ribeiro, CM Alexandre… - Molecular Phylogenetics …, 2018 - Elsevier
Stickleback fishes in the family Gasterosteidae have become model organisms in ecology
and evolutionary biology. However, even in the case of the most widely studied species in …

Comprehensive Transcriptome Analysis Reveals Accelerated Genic Evolution in a Tibet Fish, Gymnodiptychus pachycheilus

L Yang, Y Wang, Z Zhang, S He - Genome biology and …, 2015 - academic.oup.com
Elucidating the genetic mechanisms of organismal adaptation to the Tibetan Plateau at a
genomic scale can provide insights into the process of adaptive evolution. Many highland …