Recombinant protein expression in Escherichia coli: advances and challenges
Escherichia coli is one of the organisms of choice for the production of recombinant proteins.
Its use as a cell factory is well-established and it has become the most popular expression …
Its use as a cell factory is well-established and it has become the most popular expression …
Synonymous but not the same: the causes and consequences of codon bias
Despite their name, synonymous mutations have significant consequences for cellular
processes in all taxa. As a result, an understanding of codon bias is central to fields as …
processes in all taxa. As a result, an understanding of codon bias is central to fields as …
High CO2 levels drive the TCA cycle backwards towards autotrophy
L Steffens, E Pettinato, TM Steiner, A Mall, S König… - Nature, 2021 - nature.com
It has recently been shown that in anaerobic microorganisms the tricarboxylic acid (TCA)
cycle, including the seemingly irreversible citrate synthase reaction, can be reversed and …
cycle, including the seemingly irreversible citrate synthase reaction, can be reversed and …
OPTIMIZER: a web server for optimizing the codon usage of DNA sequences
P Puigbo, E Guzmán, A Romeu… - Nucleic acids …, 2007 - academic.oup.com
OPTIMIZER is an on-line application that optimizes the codon usage of a gene to increase
its expression level. Three methods of optimization are available: the 'one amino acid–one …
its expression level. Three methods of optimization are available: the 'one amino acid–one …
Codon usage bias: causative factors, quantification methods and genome‐wide patterns: with emphasis on insect genomes
SK Behura, DW Severson - Biological Reviews, 2013 - Wiley Online Library
Codon usage bias refers to the phenomenon where specific codons are used more often
than other synonymous codons during translation of genes, the extent of which varies within …
than other synonymous codons during translation of genes, the extent of which varies within …
Identification of GPI anchor attachment signals by a Kohonen self-organizing map
N Fankhauser, P Mäser - Bioinformatics, 2005 - academic.oup.com
Motivation: Anchoring of proteins to the extracytosolic leaflet of membranes via C-terminal
attachment of glycosylphosphatidylinositol (GPI) is ubiquitous and essential in eukaryotes …
attachment of glycosylphosphatidylinositol (GPI) is ubiquitous and essential in eukaryotes …
Genomic Analyses of the Microsporidian Nosema ceranae, an Emergent Pathogen of Honey Bees
Recent steep declines in honey bee health have severely impacted the beekee**
industry, presenting new risks for agricultural commodities that depend on insect pollination …
industry, presenting new risks for agricultural commodities that depend on insect pollination …
The complete mitochondrial genome of the bag-shelter moth Ochrogaster lunifer (Lepidoptera, Notodontidae)
Background Knowledge of animal mitochondrial genomes is very important to understand
their molecular evolution as well as for phylogenetic and population genetic studies. The …
their molecular evolution as well as for phylogenetic and population genetic studies. The …
Expression of codon optimized genes in microbial systems: current industrial applications and perspectives
The efficient production of functional proteins in heterologous hosts is one of the major
bases of modern biotechnology. Unfortunately, many genes are difficult to express outside …
bases of modern biotechnology. Unfortunately, many genes are difficult to express outside …
Comparison of two codon optimization strategies to enhance recombinant protein production in Escherichia coli
HG Menzella - Microbial cell factories, 2011 - Springer
Background Variations in codon usage between species are one of the major causes
affecting recombinant protein expression levels, with a significant impact on the economy of …
affecting recombinant protein expression levels, with a significant impact on the economy of …