Diffusion models: A comprehensive survey of methods and applications

L Yang, Z Zhang, Y Song, S Hong, R Xu, Y Zhao… - ACM Computing …, 2023 - dl.acm.org
Diffusion models have emerged as a powerful new family of deep generative models with
record-breaking performance in many applications, including image synthesis, video …

Diffusion models in medical imaging: A comprehensive survey

A Kazerouni, EK Aghdam, M Heidari, R Azad… - Medical Image …, 2023 - Elsevier
Denoising diffusion models, a class of generative models, have garnered immense interest
lately in various deep-learning problems. A diffusion probabilistic model defines a forward …

De novo design of protein structure and function with RFdiffusion

JL Watson, D Juergens, NR Bennett, BL Trippe, J Yim… - Nature, 2023 - nature.com
There has been considerable recent progress in designing new proteins using deep-
learning methods,,,,,,,–. Despite this progress, a general deep-learning framework for protein …

Diffusiondet: Diffusion model for object detection

S Chen, P Sun, Y Song, P Luo - Proceedings of the IEEE …, 2023 - openaccess.thecvf.com
We propose DiffusionDet, a new framework that formulates object detection as a denoising
diffusion process from noisy boxes to object boxes. During the training stage, object boxes …

Generalized biomolecular modeling and design with RoseTTAFold All-Atom

R Krishna, J Wang, W Ahern, P Sturmfels, P Venkatesh… - Science, 2024 - science.org
Deep-learning methods have revolutionized protein structure prediction and design but are
presently limited to protein-only systems. We describe RoseTTAFold All-Atom (RFAA), which …

Illuminating protein space with a programmable generative model

JB Ingraham, M Baranov, Z Costello, KW Barber… - Nature, 2023 - nature.com
Three billion years of evolution has produced a tremendous diversity of protein molecules,
but the full potential of proteins is likely to be much greater. Accessing this potential has …

Diffrf: Rendering-guided 3d radiance field diffusion

N Müller, Y Siddiqui, L Porzi, SR Bulo… - Proceedings of the …, 2023 - openaccess.thecvf.com
We introduce DiffRF, a novel approach for 3D radiance field synthesis based on denoising
diffusion probabilistic models. While existing diffusion-based methods operate on images …

Diffdock: Diffusion steps, twists, and turns for molecular docking

G Corso, H Stärk, B **g, R Barzilay… - arxiv preprint arxiv …, 2022 - arxiv.org
Predicting the binding structure of a small molecule ligand to a protein--a task known as
molecular docking--is critical to drug design. Recent deep learning methods that treat …

Protein design with guided discrete diffusion

N Gruver, S Stanton, N Frey… - Advances in neural …, 2023 - proceedings.neurips.cc
A popular approach to protein design is to combine a generative model with a discriminative
model for conditional sampling. The generative model samples plausible sequences while …

Geometric latent diffusion models for 3d molecule generation

M Xu, AS Powers, RO Dror, S Ermon… - International …, 2023 - proceedings.mlr.press
Generative models, especially diffusion models (DMs), have achieved promising results for
generating feature-rich geometries and advancing foundational science problems such as …