Mutualistic interplay between bacteriophages and bacteria in the human gut

AN Shkoporov, CJ Turkington, C Hill - Nature Reviews Microbiology, 2022 - nature.com
Bacteriophages (phages) are often described as obligate predators of their bacterial hosts,
and phage predation is one of the leading forces controlling the density and distribution of …

[HTML][HTML] Bacterial cooperation through horizontal gene transfer

IPA Lee, OT Eldakar, JP Gogarten… - Trends in ecology & …, 2022 - cell.com
Cooperation exists across all scales of biological organization, from genetic elements to
complex human societies. Bacteria cooperate by secreting molecules that benefit all …

Genome mining of biosynthetic and chemotherapeutic gene clusters in Streptomyces bacteria

KC Belknap, CJ Park, BM Barth, CP Andam - Scientific reports, 2020 - nature.com
Streptomyces bacteria are known for their prolific production of secondary metabolites, many
of which have been widely used in human medicine, agriculture and animal health. To guide …

It's the song, not the singer: an exploration of holobiosis and evolutionary theory

WF Doolittle, A Booth - Biology & Philosophy, 2017 - Springer
That holobionts (microbial communities and their animal or plant hosts) are units of selection
squares poorly with the observation that microbes are often recruited (horizontally acquired) …

Holobionts as units of selection and a model of their population dynamics and evolution

J Roughgarden, SF Gilbert, E Rosenberg… - Biological Theory, 2018 - Springer
Holobionts, consisting of a host and diverse microbial symbionts, function as distinct
biological entities anatomically, metabolically, immunologically, and developmentally …

Horizontal gene transfer as a source of conflict and cooperation in prokaryotes

RJ Hall, FJ Whelan, JO McInerney, Y Ou… - Frontiers in …, 2020 - frontiersin.org
Horizontal gene transfer (HGT) is one of the most important processes in prokaryote
evolution. The sharing of DNA can spread neutral or beneficial genes, as well as genetic …

Processes and patterns of interaction as units of selection: An introduction to ITSNTS thinking

WF Doolittle, SA Inkpen - Proceedings of the National …, 2018 - National Acad Sciences
Many practicing biologists accept that nothing in their discipline makes sense except in the
light of evolution, and that natural selection is evolution's principal sense-maker. But what …

Mechanisms that shape microbial pangenomes

MR Domingo-Sananes, JO McInerney - Trends in Microbiology, 2021 - cell.com
Analyses of multiple whole-genome sequences from the same species have revealed that
differences in gene content can be substantial, particularly in prokaryotes. Such variation …

Selection for Gaia across multiple scales

TM Lenton, SJ Daines, JG Dyke, AE Nicholson… - Trends in Ecology & …, 2018 - cell.com
Recently postulated mechanisms and models can help explain the enduring 'Gaia'puzzle of
environmental regulation mediated by life. Natural selection can produce nutrient recycling …

Selfishness driving reductive evolution shapes interdependent patterns in spatially structured microbial communities

M Wang, X Liu, Y Nie, XL Wu - The ISME Journal, 2021 - academic.oup.com
Microbes release a wide variety of metabolites to the environment that benefit the whole
population, called public goods. Public goods sharing drives adaptive function loss, and …