Understanding the evolution of immune genes in jawed vertebrates

M Vinkler, SR Fiddaman, M Těšický… - Journal of …, 2023 - academic.oup.com
Driven by co‐evolution with pathogens, host immunity continuously adapts to optimize
defence against pathogens within a given environment. Recent advances in genetics …

Predicting gene expression divergence between single-copy orthologs in two species

AA Piya, M DeGiorgio, R Assis - Genome Biology and Evolution, 2023 - academic.oup.com
Predicting gene expression divergence is integral to understanding the emergence of new
biological functions and associated traits. Whereas several sophisticated methods have …

Toll receptor ligand Spätzle 4 responses to the highly pathogenic Enterococcus faecalis from Varroa mites in honeybees

W Zhang, C Sun, H Lang, J Wang, X Li, J Guo… - PLoS …, 2023 - journals.plos.org
Honeybees play a major role in crop pollination, which supports the agricultural economy
and international food supply. The colony health of honeybees is threatened by the parasitic …

Haplotype Disequilibrium in the TLR Genes of Czech Red Pied Cattle

K Samaké, K Novák - Diversity, 2023 - mdpi.com
Hybrid resequencing of the antibacterial innate immune genes coding for toll-like receptors,
namely TLR1, TLR2, TLR4, TLR5, and TLR6, using HiSeq and PacBio technologies of …

Evolution and genetics of accessory gland transcriptome divergence between Drosophila melanogaster and D. simulans

AC Majane, JM Cridland, LK Blair, DJ Begun - Genetics, 2024 - academic.oup.com
Studies of allele-specific expression in interspecific hybrids have provided important insights
into gene-regulatory divergence and hybrid incompatibilities. Many such investigations in …

Solanum pan-genomics and pan-genetics reveal paralogs as contingencies in crop engineering

M Benoit, KM Jenike, JW Satterlee, S Ramakrishnan… - bioRxiv, 2024 - biorxiv.org
Pan-genomics and genome editing technologies are revolutionizing the breeding of globally
cultivated crops. A transformative opportunity lies in the reciprocal exchange of genotype-to …

Pathogen-mediated selection in the immune system of rodents: Exploring selection targets, functional effects and trade-offs

M Nandakumar - 2024 - portal.research.lu.se
Pathogens cause disease and play an important role in sha** evolution of the host
immune system. They create pressure on host immunity to evolve in numerous ways, most …

Predicting expression divergence and its evolutionary parameters between single-copy genes in two species

AA Piya, M DeGiorgio, R Assis - bioRxiv, 2022 - biorxiv.org
Predicting gene expression divergence and its evolutionary parameters is integral to
understanding the emergence of new gene functions and associated traits. Whereas several …

Functional polymorphism in genes for the components of the Toll signalling pathway of the natural immunity system in Bos taurus

K Samaké - 2024 - dspace.cuni.cz
The general aim of the work was to document the variation in the genes of the Toll signalling
pathway in the innate immune system of cattle. This included the analysis of the potential of …

Evolution of the transcriptomic regulation in the primate lineage

L Ferrández Peral - 2022 - repositori.upf.edu
The evolution of transcriptomes has been linked to the emergence of novel phenotypes.
However, our knowledge on how isoform diversity has impacted recent human evolution is …