A field guide to eukaryotic transposable elements

JN Wells, C Feschotte - Annual review of genetics, 2020 - annualreviews.org
Transposable elements (TEs) are mobile DNA sequences that propagate within genomes.
Through diverse invasion strategies, TEs have come to occupy a substantial fraction of …

Museum genomics

DC Card, B Shapiro, G Giribet, C Moritz… - Annual Review of …, 2021 - annualreviews.org
Natural history collections are invaluable repositories of biological information that provide
an unrivaled record of Earth's biodiversity. Museum genomics—genomics research using …

The tuatara genome reveals ancient features of amniote evolution

NJ Gemmell, K Rutherford, S Prost, M Tollis, D Winter… - Nature, 2020 - nature.com
The tuatara (Sphenodon punctatus)—the only living member of the reptilian order
Rhynchocephalia (Sphenodontia), once widespread across Gondwana,—is an iconic …

The Indian cobra reference genome and transcriptome enables comprehensive identification of venom toxins

K Suryamohan, SP Krishnankutty, J Guillory, M Jevit… - Nature Genetics, 2020 - nature.com
Snakebite envenoming is a serious and neglected tropical disease that kills~ 100,000
people annually. High-quality, genome-enabled comprehensive characterization of toxin …

The origins and evolution of chromosomes, dosage compensation, and mechanisms underlying venom regulation in snakes

DR Schield, DC Card, NR Hales, BW Perry… - Genome …, 2019 - genome.cshlp.org
Here we use a chromosome-level genome assembly of a prairie rattlesnake (Crotalus
viridis), together with Hi-C, RNA-seq, and whole-genome resequencing data, to study key …

Megaevolutionary dynamics and the timing of evolutionary innovation in reptiles

TR Simões, O Vernygora, MW Caldwell… - Nature …, 2020 - nature.com
The origin of phenotypic diversity among higher clades is one of the most fundamental
topics in evolutionary biology. However, due to methodological challenges, few studies have …

The rise of genomics in snake venom research: recent advances and future perspectives

W Rao, K Kalogeropoulos, ME Allentoft… - …, 2022 - academic.oup.com
Snake venoms represent a danger to human health, but also a gold mine of bioactive
proteins that can be harnessed for drug discovery purposes. The evolution of snakes and …

The squamate tree of life

TR Simões, RA Pyron - Bulletin of the Museum of Comparative Zoology, 2021 - BioOne
Squamates (lizards, snakes, and their kin such as amphisbaenians, or “worm lizards”)
represent the world's most diverse clade of terrestrial vertebrates with∼ 11,000 described …

Tracking the recruitment and evolution of snake toxins using the evolutionary context provided by the Bothrops jararaca genome

DD Almeida, VL Viala, PG Nachtigall… - Proceedings of the …, 2021 - National Acad Sciences
Venom is a key adaptive innovation in snakes, and how nonvenom genes were co-opted to
become part of the toxin arsenal is a significant evolutionary question. While this process …

Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories

BP Bentley, T Carrasco-Valenzuela… - Proceedings of the …, 2023 - National Acad Sciences
Sea turtles represent an ancient lineage of marine vertebrates that evolved from terrestrial
ancestors over 100 Mya. The genomic basis of the unique physiological and ecological traits …