Modern microbiology: Embracing complexity through integration across scales
AM Eren, JF Banfield - Cell, 2024 - cell.com
Microbes were the only form of life on Earth for most of its history, and they still account for
the vast majority of life's diversity. They convert rocks to soil, produce much of the oxygen we …
the vast majority of life's diversity. They convert rocks to soil, produce much of the oxygen we …
Advancing environmental biotechnology with microbial community modeling rooted in functional 'omics
Highlights•Many environmental biotechnologies are driven by diverse microbiomes.•Current
environmental process models do not account for physiological diversity.•New modeling …
environmental process models do not account for physiological diversity.•New modeling …
Codon bias, nucleotide selection, and genome size predict in situ bacterial growth rate and transcription in rewetted soil
In soils, the first rain after a prolonged dry period represents a major pulse event impacting
soil microbial community function, yet we lack a full understanding of the genomic traits …
soil microbial community function, yet we lack a full understanding of the genomic traits …
MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment
DNA/RNA-stable isotope probing (SIP) is a powerful tool to link in situ microbial activity to
sequencing data. Every SIP dataset captures distinct information about microbial community …
sequencing data. Every SIP dataset captures distinct information about microbial community …
A data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence (MISIP)
DNA/RNA-stable isotope probing (SIP) is a powerful tool to link in situ microbial activity to
sequencing data. Every SIP dataset captures distinct information about microbial community …
sequencing data. Every SIP dataset captures distinct information about microbial community …
Integrating insights on microbial metabolic potential into process engineering for resource recovery with biological wastewater treatment
P Sampara - 2024 - open.library.ubc.ca
Biological nutrient removal within water resource recovery facilities (WRRFs) is driven by
diverse microbes that transform carbon, phosphorus, and nitrogen present in untreated …
diverse microbes that transform carbon, phosphorus, and nitrogen present in untreated …
[BOG][B] The Other Dark Matter: Pyrogenic Organic Matter Cycling by Post-Fire Soil Microbes
N Zeba - 2023 - search.proquest.com
Pyrogenic organic matter (PyOM), formed during the incomplete combustion of organic
matter, is a carbon-rich substance with potential for long-term carbon storage. This thesis …
matter, is a carbon-rich substance with potential for long-term carbon storage. This thesis …
[PDF][PDF] Targeted metaproteomics of metabolically active microbial populations in a full-scale biogas facility
SE Friedline - 2023 - open.library.ubc.ca
Linking the genomic potential of uncultivated microbes to their in situ metabolic functions
remains a critical challenge in the field of microbial ecology. This knowledge gap is …
remains a critical challenge in the field of microbial ecology. This knowledge gap is …