Machine learning for detecting gene-gene interactions: a review

BA McKinney, DM Reif, MD Ritchie, JH Moore - Applied bioinformatics, 2006‏ - Springer
Complex interactions among genes and environmental factors are known to play a role in
common human disease aetiology. There is a growing body of evidence to suggest that …

A weakly informative default prior distribution for logistic and other regression models

A Gelman, A Jakulin, MG Pittau, YS Su - 2008‏ - projecteuclid.org
We propose a new prior distribution for classical (nonhierarchical) logistic regression
models, constructed by first scaling all nonbinary variables to have mean 0 and standard …

Gene selection with guided regularized random forest

H Deng, G Runger - Pattern recognition, 2013‏ - Elsevier
The regularized random forest (RRF) was recently proposed for feature selection by building
only one ensemble. In RRF the features are evaluated on a part of the training data at each …

Searching for interacting features in subset selection

Z Zhao, H Liu - Intelligent Data Analysis, 2009‏ - content.iospress.com
The evolving and adapting capabilities of robust intelligence are best manifested in its ability
to learn. Machine learning enables computer systems to learn, and improve performance …

A novel feature selection method considering feature interaction

Z Zeng, H Zhang, R Zhang, C Yin - Pattern recognition, 2015‏ - Elsevier
Interacting features are those that appear to be irrelevant or weakly relevant with the class
individually, but when it combined with other features, it may highly correlate to the class …

Feature selection via regularized trees

H Deng, G Runger - The 2012 International Joint Conference …, 2012‏ - ieeexplore.ieee.org
We propose a tree regularization framework, which enables many tree models to perform
feature selection efficiently. The key idea of the regularization framework is to penalize …

Feature interaction for streaming feature selection

P Zhou, P Li, S Zhao, X Wu - IEEE Transactions on Neural …, 2020‏ - ieeexplore.ieee.org
Traditional feature selection methods assume that all data instances and features are known
before learning. However, it is not the case in many real-world applications that we are more …

Scalable and accurate online feature selection for big data

K Yu, X Wu, W Ding, J Pei - … on Knowledge Discovery from Data (TKDD), 2016‏ - dl.acm.org
Feature selection is important in many big data applications. Two critical challenges closely
associate with big data. First, in many big data applications, the dimensionality is extremely …

Machine learning based on attribute interactions

A Jakulin - 2005‏ - eprints.fri.uni-lj.si
Two attributes $ A $ and $ B $ are said to interact when it helps to observe the attribute
values of both attributes together. This is an example of a $2 $-way interaction. In general, a …

Gradient-based multi-label feature selection considering three-way variable interaction

Y Zou, X Hu, P Li - Pattern Recognition, 2024‏ - Elsevier
Abstract Nowadays, Multi-Label Feature Selection (MLFS) attracts more and more attention
to tackle the high-dimensional problem in multi-label data. A key characteristic of existing …