Uncertainty and sensitivity analyses methods for agent-based mathematical models: An introductory review

S Hamis, S Stratiev, GG Powathil - The physics of cancer: Research …, 2021 - World Scientific
Multiscale, agent-based mathematical models of biological systems are often associated
with model uncertainty and sensitivity to parameter perturbations. Here, three uncertainty …

Computational models of the JAK1/2-STAT1 signaling

A Gambin, A Charzyńska, A Ellert-Miklaszewska… - Jak-stat, 2013 - Taylor & Francis
Despite a conceptually simple mechanism of signaling, the JAK-STAT pathway exhibits
considerable behavioral complexity. Computational pathway models are tools to investigate …

Robustness metrics: Consolidating the multiple approaches to quantify robustness

S Moritz Göhler, T Eifler… - Journal of …, 2016 - asmedigitalcollection.asme.org
The robustness of a design has a major influence on how much the product's performance
will vary and is of great concern to design, quality, and production engineers. While …

Quantifying resilience and uncertainty in coastal flooding events: Framework for assessing urban vulnerability

M Karamouz, Z Zahmatkesh - Journal of Water Resources Planning …, 2017 - ascelibrary.org
Flood resilience is a desirable state of natural and built environments in dealing with
hazards such as extreme rainfalls, storm surges, and hurricanes. Here, resilience means the …

Modelling the efficacy of hyperthermia treatment

M Rybiński, Z Szymańska… - Journal of The Royal …, 2013 - royalsocietypublishing.org
Multimodal oncological strategies which combine chemotherapy or radiotherapy with
hyperthermia, have a potential of improving the efficacy of the non-surgical methods of …

Efficient model-assisted probability of detection and sensitivity analysis for ultrasonic testing simulations using stochastic metamodeling

X Du, L Leifsson, W Meeker… - Journal of …, 2019 - asmedigitalcollection.asme.org
Abstract Model-assisted probability of detection (MAPOD) and sensitivity analysis (SA) are
important for quantifying the inspection capability of nondestructive testing (NDT) systems …

Clostridium butyricum population balance model: Predicting dynamic metabolic flux distributions using an objective function related to extracellular glycerol content

LM Serrano-Bermúdez, AF González Barrios… - PLoS …, 2018 - journals.plos.org
Background Extensive experimentation has been conducted to increment 1, 3-propanediol
(PDO) production using Clostridium butyricum cultures in glycerol, but computational …

Model reductions in biochemical reaction networks

SHA Khoshnaw - 2015 - figshare.le.ac.uk
Many complex kinetic models in the field of biochemical reactions contain a large number of
species and reactions. These models often require a huge array of computational tools to …

Identifying critical parameters in SIR model for spread of disease

SHA Khoshnaw, NA Mohammad, RH Salih - Open Journal of Modelling …, 2016 - scirp.org
Calculating analytical approximate solutions for non-linear infectious disease models is a
difficult task. Such models often require computational tools to analyse analytical …

Mathematical model for the ebola virus disease

A Akgül, SHA Khoshnaw… - Journal of Advanced …, 2018 - ingentaconnect.com
Mathematical modeling for epidemic models are important tools in systems biology.
Studying the behavior of diseases models frequently needs some methods of model …