Network medicine: a network-based approach to human disease

AL Barabási, N Gulbahce, J Loscalzo - Nature reviews genetics, 2011 - nature.com
Given the functional interdependencies between the molecular components in a human cell,
a disease is rarely a consequence of an abnormality in a single gene, but reflects the …

[HTML][HTML] The papillomavirus E7 proteins

A Roman, K Munger - Virology, 2013 - Elsevier
E7 is an accessory protein that is not encoded by all papillomaviruses. The E7 amino
terminus contains two regions of similarity to conserved regions 1 and 2 of the adenovirus …

Network medicine framework for identifying drug-repurposing opportunities for COVID-19

D Morselli Gysi, Í Do Valle, M Zitnik, A Ameli… - Proceedings of the …, 2021 - pnas.org
The COVID-19 pandemic has highlighted the need to quickly and reliably prioritize clinically
approved compounds for their potential effectiveness for severe acute respiratory syndrome …

Predicting perturbation patterns from the topology of biological networks

M Santolini, AL Barabási - Proceedings of the National Academy of …, 2018 - pnas.org
High-throughput technologies, offering an unprecedented wealth of quantitative data
underlying the makeup of living systems, are changing biology. Notably, the systematic …

The BioGRID interaction database: 2015 update

A Chatr-Aryamontri, BJ Breitkreutz… - Nucleic acids …, 2015 - academic.oup.com
Abstract The Biological General Repository for Interaction Datasets (BioGRID:
http://thebiogrid. org) is an open access database that houses genetic and protein …

Human symptoms–disease network

XZ Zhou, J Menche, AL Barabási, A Sharma - Nature communications, 2014 - nature.com
In the post-genomic era, the elucidation of the relationship between the molecular origins of
diseases and their resulting phenotypes is a crucial task for medical research. Here, we use …

Fundamentals of protein interaction network map**

J Snider, M Kotlyar, P Saraon, Z Yao… - Molecular systems …, 2015 - embopress.org
Studying protein interaction networks of all proteins in an organism (“interactomes”) remains
one of the major challenges in modern biomedicine. Such information is crucial to …

Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins

O Rozenblatt-Rosen, RC Deo, M Padi, G Adelmant… - Nature, 2012 - nature.com
Genotypic differences greatly influence susceptibility and resistance to disease.
Understanding genotype–phenotype relationships requires that phenotypes be viewed as …

The endoplasmic reticulum unfolded protein response–homeostasis, cell death and evolution in virus infections

V Prasad, UF Greber - FEMS microbiology reviews, 2021 - academic.oup.com
Viruses elicit cell and organismic stress, and offset homeostasis. They trigger intrinsic, innate
and adaptive immune responses, which limit infection. Viruses restore homeostasis by …

VirHostNet 2.0: surfing on the web of virus/host molecular interactions data

T Guirimand, S Delmotte, V Navratil - Nucleic acids research, 2015 - academic.oup.com
Abstract VirHostNet release 2.0 (http://virhostnet. prabi. fr) is a knowledgebase dedicated to
the network-based exploration of virus–host protein–protein interactions. Since the previous …