Recent progress and challenges in population genetics of polyploid organisms: an overview of current state‐of‐the‐art molecular and statistical tools

F Dufresne, M Stift, R Vergilino, BK Mable - Molecular ecology, 2014 - Wiley Online Library
Despite the importance of polyploidy and the increasing availability of new genomic data,
there remain important gaps in our knowledge of polyploid population genetics. These gaps …

Is self‐fertilization an evolutionary dead end?

B Igic, JW Busch - New Phytologist, 2013 - Wiley Online Library
A compound hypothesis positing that self‐fertilization is an evolutionary dead end conflates
two distinct claims: the transition from outcrossing to selfing is unidirectional; and the …

A time-calibrated road map of Brassicaceae species radiation and evolutionary history

N Hohmann, EM Wolf, MA Lysak, MA Koch - The Plant Cell, 2015 - academic.oup.com
The Brassicaceae include several major crop plants and numerous important model species
in comparative evolutionary research such as Arabidopsis, Brassica, Boechera …

Polyploidy before and after domestication of crop species

T Akagi, K Jung, K Masuda, KK Shimizu - Current Opinion in Plant Biology, 2022 - Elsevier
Recent advances in the genomics of polyploid species answer some of the long-standing
questions about the role of polyploidy in crop species. Here, we summarize the current …

Evolution of the mating system in colonizing plants

JR Pannell - Invasion Genetics: The Baker and Stebbins …, 2016 - Wiley Online Library
Colonization is likely to be more successful for species with an ability to self‐fertilize and
thus to establish new populations as single individuals. As a result, self‐compatibility should …

Molecular insights into self-incompatibility systems: From evolution to breeding

D Zhang, YY Li, X Zhao, C Zhang, DK Liu, S Lan… - Plant …, 2024 - cell.com
Plants have evolved diverse self-incompatibility (SI) systems for outcrossing. Since Darwin's
time, considerable progress has been made toward elucidating this unrivaled reproductive …

Evolution of selfing: recurrent patterns in molecular adaptation

KK Shimizu, T Tsuchimatsu - Annual Review of Ecology …, 2015 - annualreviews.org
Selfing has evolved in animals, fungi, and plants, and since Darwin's pioneering study, it is
considered one of the most frequent evolutionary trends in flowering plants. Generally, the …

Robustness and the generalist niche of polyploid species: genome shock or gradual evolution?

KK Shimizu - Current Opinion in Plant Biology, 2022 - Elsevier
The prevalence of polyploidy in wild and crop species has stimulated debate over its
evolutionary advantages and disadvantages. Previous studies have focused on changes …

Genome assembly and annotation of Arabidopsis halleri, a model for heavy metal hyperaccumulation and evolutionary ecology

RV Briskine, T Paape… - Molecular ecology …, 2017 - Wiley Online Library
The self‐incompatible species Arabidopsis halleri is a close relative of the self‐compatible
model plant Arabidopsis thaliana. The broad European and Asian distribution and heavy …

Gene duplication and genetic exchange drive the evolution of S-RNase-based self-incompatibility in Petunia

K Kubo, T Paape, M Hatakeyama, T Entani, A Takara… - Nature Plants, 2015 - nature.com
Self-incompatibility (SI) systems in flowering plants distinguish self-and non-self pollen to
prevent inbreeding. While other SI systems rely on the self-recognition between specific …