Deep learning approaches for data augmentation in medical imaging: a review

A Kebaili, J Lapuyade-Lahorgue, S Ruan - Journal of Imaging, 2023 - mdpi.com
Deep learning has become a popular tool for medical image analysis, but the limited
availability of training data remains a major challenge, particularly in the medical field where …

Graph-based deep learning for medical diagnosis and analysis: past, present and future

D Ahmedt-Aristizabal, MA Armin, S Denman, C Fookes… - Sensors, 2021 - mdpi.com
With the advances of data-driven machine learning research, a wide variety of prediction
problems have been tackled. It has become critical to explore how machine learning and …

The OpenNeuro resource for sharing of neuroscience data

CJ Markiewicz, KJ Gorgolewski, F Feingold, R Blair… - Elife, 2021 - elifesciences.org
The sharing of research data is essential to ensure reproducibility and maximize the impact
of public investments in scientific research. Here, we describe OpenNeuro, a BRAIN …

Standardizing workflows in imaging transcriptomics with the abagen toolbox

RD Markello, A Arnatkeviciute, JB Poline, BD Fulcher… - elife, 2021 - elifesciences.org
Gene expression fundamentally shapes the structural and functional architecture of the
human brain. Open-access transcriptomic datasets like the Allen Human Brain Atlas provide …

A decade of test-retest reliability of functional connectivity: A systematic review and meta-analysis

S Noble, D Scheinost, RT Constable - Neuroimage, 2019 - Elsevier
Background Once considered mere noise, fMRI-based functional connectivity has become a
major neuroscience tool in part due to early studies demonstrating its reliability. These …

Precision functional map** of individual human brains

EM Gordon, TO Laumann, AW Gilmore, DJ Newbold… - Neuron, 2017 - cell.com
Human functional MRI (fMRI) research primarily focuses on analyzing data averaged across
groups, which limits the detail, specificity, and clinical utility of fMRI resting-state functional …

Evidence for embracing normative modeling

S Rutherford, P Barkema, IF Tso, C Sripada… - Elife, 2023 - elifesciences.org
In this work, we expand the normative model repository introduced in Rutherford et al.,
2022a to include normative models charting lifespan trajectories of structural surface area …

The human brainnetome atlas: a new brain atlas based on connectional architecture

L Fan, H Li, J Zhuo, Y Zhang, J Wang, L Chen… - Cerebral …, 2016 - academic.oup.com
The human brain atlases that allow correlating brain anatomy with psychological and
cognitive functions are in transition from ex vivo histology-based printed atlases to digital …

[HTML][HTML] BrainStat: A toolbox for brain-wide statistics and multimodal feature associations

S Larivière, Ş Bayrak, RV de Wael, O Benkarim… - NeuroImage, 2023 - Elsevier
Abstract Analysis and interpretation of neuroimaging datasets has become a
multidisciplinary endeavor, relying not only on statistical methods, but increasingly on …

Scan‐specific robust artificial‐neural‐networks for k‐space interpolation (RAKI) reconstruction: database‐free deep learning for fast imaging

M Akçakaya, S Moeller, S Weingärtner… - Magnetic resonance …, 2019 - Wiley Online Library
Purpose To develop an improved k‐space reconstruction method using scan‐specific deep
learning that is trained on autocalibration signal (ACS) data. Theory Robust artificial‐neural …