[HTML][HTML] Soil microbiome study based on DNA extraction: a review

U Wydro - Water, 2022 - mdpi.com
In recent years, many different methods that allow for the analysis of the biodiversity and
structure of the community of microorganisms inhabiting the soil environment have emerged …

The genotype of barley cultivars influences multiple aspects of their associated microbiota via differential root exudate secretion

A Pacheco-Moreno, A Bollmann-Giolai, G Chandra… - PLoS …, 2024 - journals.plos.org
Plant-associated microbes play vital roles in promoting plant growth and health, with plants
secreting root exudates into the rhizosphere to attract beneficial microbes. Exudate …

Genetic determinants of switchgrass-root-associated microbiota in field sites spanning its natural range

JA Edwards, UB Saran, J Bonnette, A MacQueen, J Yin… - Current Biology, 2023 - cell.com
A fundamental goal in plant microbiome research is to determine the relative impacts of host
and environmental effects on root microbiota composition, particularly how host genotype …

Combined control of plant diseases by Bacillus subtilis SL44 and Enterobacter hormaechei Wu15

J Wang, Z Deng, X Gao, J Long, Y Wang… - Science of The Total …, 2024 - Elsevier
Co-incubation of plant growth promoting rhizobacteria (PGPRs) have been proposed as a
potential alternative to pesticides for controlling fungal pathogens in crops, but their …

Comparison of DNA extraction methods on different sample matrices within the same terrestrial ecosystem

G Galla, N Praeg, T Rzehak, E Sprecher, F Colla… - Scientific Reports, 2024 - nature.com
Metataxonomic studies of ecosystem microbiotas require the simultaneous processing of
samples with contrasting physical and biochemical traits. However, there are no published …

[HTML][HTML] The impact of desertification on soil health stability in Semi-Arid alpine Regions: A case study of the Qilian Mountains in the northeastern Tibetan Plateau …

Z Liu, J Si, X He, B Jia, D Zhou, C Wang, X Zhu, J Qin… - Ecological …, 2024 - Elsevier
Desertification poses a serious threat to ecosystem health, and with global changes, the
variability and uncertainty of ecological functions in semi-arid alpine regions are increasing …

Forensic botany: time to embrace natural history collections, large scale environmental data and environmental DNA

MA Spencer - Emerging Topics in Life Sciences, 2021 - portlandpress.com
Forensic botany is a diverse discipline that spans many aspects of plant sciences,
particularly taxonomy, field botany, anatomy, and ecology. Internationally, there is a …

High-throughput DNA extraction and cost-effective miniaturized metagenome and amplicon library preparation of soil samples for DNA sequencing

TBN Jensen, SM Dall, S Knutsson, SM Karst… - Plos one, 2024 - journals.plos.org
Reductions in sequencing costs have enabled widespread use of shotgun metagenomics
and amplicon sequencing, which have drastically improved our understanding of the …

Improving soil structure and function for continuous crop** of sweet melon using microalgae-based biological fertilizer

L Yang, X Song, Y Feng, X Qiu, X Yan, R Ruan… - Algal Research, 2025 - Elsevier
Melon occupies an important position in fruits and vegetables production and consumption
in China for its rich nutrient content. However, continuous cultivation of melons is …

Extraction of Genomic DNA from Soil Samples by Polyethylene Glycol-Modified Magnetic Particles via Isopropanol Promotion and Ca2+ Mediation

W **e, J Xue, R Chen, H Su, X Fang, Q Wu, W Yang… - Langmuir, 2024 - ACS Publications
Obtaining reliable and informative DNA data from soil samples is challenging due to the
presence of interfering substances and typically low DNA yields. In this work, we prepared …