A guide for the diagnosis of rare and undiagnosed disease: beyond the exome

S Marwaha, JW Knowles, EA Ashley - Genome medicine, 2022 - Springer
Rare diseases affect 30 million people in the USA and more than 300–400 million
worldwide, often causing chronic illness, disability, and premature death. Traditional …

Network pharmacology approach for medicinal plants: review and assessment

F Noor, M Tahir ul Qamar, UA Ashfaq, A Albutti… - Pharmaceuticals, 2022 - mdpi.com
Natural products have played a critical role in medicine due to their ability to bind and
modulate cellular targets involved in disease. Medicinal plants hold a variety of bioactive …

DGIdb 3.0: a redesign and expansion of the drug–gene interaction database

KC Cotto, AH Wagner, YY Feng, S Kiwala… - Nucleic acids …, 2018 - academic.oup.com
The drug–gene interaction database (DGIdb, www. dgidb. org) consolidates, organizes and
presents drug–gene interactions and gene druggability information from papers, databases …

Integrated omics: tools, advances and future approaches

BB Misra, C Langefeld, M Olivier… - Journal of molecular …, 2019 - jme.bioscientifica.com
With the rapid adoption of high-throughput omic approaches to analyze biological samples
such as genomics, transcriptomics, proteomics, and metabolomics, each analysis can …

Machine learning and integrative analysis of biomedical big data

B Mirza, W Wang, J Wang, H Choi, NC Chung, P ** - Genes, 2019 - mdpi.com
Recent developments in high-throughput technologies have accelerated the accumulation
of massive amounts of omics data from multiple sources: genome, epigenome …

Cloud computing for genomic data analysis and collaboration

B Langmead, A Nellore - Nature Reviews Genetics, 2018 - nature.com
Next-generation sequencing has made major strides in the past decade. Studies based on
large sequencing data sets are growing in number, and public archives for raw sequencing …

DGIdb 2.0: mining clinically relevant drug–gene interactions

AH Wagner, AC Coffman, BJ Ainscough… - Nucleic acids …, 2016 - academic.oup.com
Abstract The Drug–Gene Interaction Database (DGIdb, www. dgidb. org) is a web resource
that consolidates disparate data sources describing drug–gene interactions and gene …

A review of bioinformatic pipeline frameworks

J Leipzig - Briefings in bioinformatics, 2017 - academic.oup.com
High-throughput bioinformatic analyses increasingly rely on pipeline frameworks to process
sequence and metadata. Modern implementations of these frameworks differ on three key …

Survey on multi-omics, and multi-omics data analysis, integration and application

MH Shahrajabian, W Sun - Current Pharmaceutical Analysis, 2023 - benthamdirect.com
Multi-omics approaches have developed as a profitable technique for plant systems, a
popular method in medical and biological sciences underlining the necessity to outline new …

Using phenocams to monitor our changing Earth: toward a global phenocam network

TB Brown, KR Hultine, H Steltzer… - Frontiers in Ecology …, 2016 - Wiley Online Library
Rapid changes to the biosphere are altering ecological processes worldwide. Develo**
informed policies for mitigating the impacts of environmental change requires an …