SNP genoty** and population genomics from expressed sequences–current advances and future possibilities

P De Wit, MH Pespeni, SR Palumbi - Molecular ecology, 2015 - Wiley Online Library
With the rapid increase in production of genetic data from new sequencing technologies, a
myriad of new ways to study genomic patterns in nonmodel organisms are currently …

Conifer genomics and adaptation: at the crossroads of genetic diversity and genome function

J Prunier, JP Verta, JJ MacKay - New Phytologist, 2016 - Wiley Online Library
Conifers have been understudied at the genomic level despite their worldwide ecological
and economic importance but the situation is rapidly changing with the development of next …

Non-adaptive plasticity potentiates rapid adaptive evolution of gene expression in nature

CK Ghalambor, KL Hoke, EW Ruell, EK Fischer… - Nature, 2015 - nature.com
Phenotypic plasticity is the capacity for an individual genotype to produce different
phenotypes in response to environmental variation. Most traits are plastic, but the degree to …

Detecting signatures of selection on gene expression

PD Price, DH Palmer Droguett, JA Taylor… - Nature Ecology & …, 2022 - nature.com
A substantial amount of phenotypic diversity results from changes in gene expression levels
and patterns. Understanding how the transcriptome evolves is therefore a key priority in …

Strong phenotypic plasticity limits potential for evolutionary responses to climate change

V Oostra, M Saastamoinen, BJ Zwaan… - Nature …, 2018 - nature.com
Phenotypic plasticity, the expression of multiple phenotypes from one genome, is a
widespread adaptation to short-term environmental fluctuations, but whether it facilitates …

Genetic constraints, transcriptome plasticity, and the evolutionary response to climate change

ML Logan, CL Cox - Frontiers in Genetics, 2020 - frontiersin.org
In situ adaptation to climate change will be critical for the persistence of many ectotherm
species due to their relative lack of dispersal capacity. Climate change is causing increases …

Gene co-expression network connectivity is an important determinant of selective constraint

N Mähler, J Wang, BK Terebieniec, PK Ingvarsson… - PLoS …, 2017 - journals.plos.org
While several studies have investigated general properties of the genetic architecture of
natural variation in gene expression, few of these have considered natural, outbreeding …

Genomic insights into selection for heterozygous alleles and woody traits in Populus tomentosa

P Li, L **ao, Q Du, M Quan, Y Song… - Plant Biotechnology …, 2023 - Wiley Online Library
Heterozygous alleles are widespread in outcrossing and clonally propagated woody plants.
The variation in heterozygosity that underlies population adaptive evolution and phenotypic …

Adaptation to heat stress reduces phenotypic and transcriptional plasticity in a marine copepod

MW Kelly, MS Pankey, MB DeBiasse… - Functional …, 2017 - Wiley Online Library
Organisms may respond to changing environments through phenotypic plasticity or adaptive
evolution. These two processes are not mutually exclusive and may either dampen or …

Transcriptome profiling of Lymnaea stagnalis (Gastropoda) for ecoimmunological research

O Seppälä, JC Walser, T Cereghetti, K Seppälä, T Salo… - BMC genomics, 2021 - Springer
Background Host immune function can contribute to numerous ecological/evolutionary
processes. Ecoimmunological studies, however, typically use one/few phenotypic immune …