Morphogen rules: design principles of gradient-mediated embryo patterning
The Drosophila blastoderm and the vertebrate neural tube are archetypal examples of
morphogen-patterned tissues that create precise spatial patterns of different cell types. In …
morphogen-patterned tissues that create precise spatial patterns of different cell types. In …
Morphogen gradients: from generation to interpretation
Morphogens are long-range signaling molecules that pattern develo** tissues in a
concentration-dependent manner. The graded activity of morphogens within tissues …
concentration-dependent manner. The graded activity of morphogens within tissues …
Chromatin accessibility in the Drosophila embryo is determined by transcription factor pioneering and enhancer activation
KJ Brennan, M Weilert, S Krueger, A Pampari, H Liu… - Developmental cell, 2023 - cell.com
Chromatin accessibility is integral to the process by which transcription factors (TFs) read out
cis-regulatory DNA sequences, but it is difficult to differentiate between TFs that drive …
cis-regulatory DNA sequences, but it is difficult to differentiate between TFs that drive …
The gap gene network
J Jaeger - Cellular and Molecular Life Sciences, 2011 - Springer
Gap genes are involved in segment determination during the early development of the fruit
fly Drosophila melanogaster as well as in other insects. This review attempts to synthesize …
fly Drosophila melanogaster as well as in other insects. This review attempts to synthesize …
The Capicua repressor–a general sensor of RTK signaling in development and disease
G Jiménez, SY Shvartsman… - Journal of cell …, 2012 - journals.biologists.com
Receptor tyrosine kinase (RTK) signaling pathways control multiple cellular decisions in
metazoans, often by regulating the expression of downstream genes. In Drosophila …
metazoans, often by regulating the expression of downstream genes. In Drosophila …
mRNA localization and translational control in Drosophila oogenesis
P Lasko - Cold Spring Harbor perspectives in biology, 2012 - cshperspectives.cshlp.org
Localization of an mRNA species to a particular subcellular region can complement
translational control mechanisms to produce a restricted spatial distribution of the protein it …
translational control mechanisms to produce a restricted spatial distribution of the protein it …
Transcriptional Enhancers in Drosophila
Key discoveries in Drosophila have shaped our understanding of cellular “enhancers.” With
a special focus on the fly, this chapter surveys properties of these adaptable cis-regulatory …
a special focus on the fly, this chapter surveys properties of these adaptable cis-regulatory …
[HTML][HTML] A system of repressor gradients spatially organizes the boundaries of Bicoid-dependent target genes
H Chen, Z Xu, C Mei, D Yu, S Small - Cell, 2012 - cell.com
The homeodomain (HD) protein Bicoid (Bcd) is thought to function as a gradient morphogen
that positions boundaries of target genes via threshold-dependent activation mechanisms …
that positions boundaries of target genes via threshold-dependent activation mechanisms …
Predictive modeling reveals that higher-order cooperativity drives transcriptional repression in a synthetic developmental enhancer
A challenge in quantitative biology is to predict output patterns of gene expression from
knowledge of input transcription factor patterns and from the arrangement of binding sites for …
knowledge of input transcription factor patterns and from the arrangement of binding sites for …
Concentration dependent chromatin states induced by the bicoid morphogen gradient
CE Hannon, SA Blythe, EF Wieschaus - Elife, 2017 - elifesciences.org
In Drosophila, graded expression of the maternal transcription factor Bicoid (Bcd) provides
positional information to activate target genes at different positions along the anterior …
positional information to activate target genes at different positions along the anterior …