People, pollution and pathogens–Global change impacts in mountain freshwater ecosystems

DS Schmeller, A Loyau, K Bao, W Brack… - Science of the Total …, 2018 - Elsevier
Mountain catchments provide for the livelihood of more than half of humankind, and have
become a key destination for tourist and recreation activities globally. Mountain ecosystems …

Next-generation sequencing applications for the study of fungal pathogens

S Jiang, Y Chen, S Han, L Lv, L Li - Microorganisms, 2022 - mdpi.com
Next-generation sequencing (NGS) has become a widely used technology in biological
research. NGS applications for clinical pathogen detection have become vital technologies …

Patterns of eukaryotic diversity from the surface to the deep-ocean sediment

T Cordier, IB Angeles, N Henry, F Lejzerowicz… - Science …, 2022 - science.org
Remote deep-ocean sediment (DOS) ecosystems are among the least explored biomes on
Earth. Genomic assessments of their biodiversity have failed to separate indigenous benthic …

Composition of bacterial communities in municipal wastewater treatment plant

L Zhang, Z Shen, W Fang, G Gao - Science of the Total Environment, 2019 - Elsevier
Efforts to understand the environmental and biological factors that influence the dynamics of
microbial communities have received substantial attention in microbial ecology. In this study …

Diversity and temporal patterns of planktonic protist assemblages at a Mediterranean Long Term Ecological Research site

R Piredda, MP Tomasino, AM D'erchia… - FEMS microbiology …, 2017 - academic.oup.com
We tracked temporal changes in protist diversity at the Long Term Ecological Research
(LTER) station MareChiara in the Gulf of Naples (Mediterranean Sea) on eight dates in 2011 …

pr2‐primers: An 18S rRNA primer database for protists

D Vaulot, S Geisen, F Mahé… - Molecular Ecology …, 2022 - Wiley Online Library
Metabarcoding of microbial eukaryotes (collectively known as protists) has developed
tremendously in the last decade, almost solely relying on the 18S rRNA gene. As microbial …

Global biogeography of marine fungi is shaped by the environment

KH Tisthammer, GM Cobian, AS Amend - Fungal Ecology, 2016 - Elsevier
Fungi are essential components of marine ecosystems, yet very little is known about their
global distribution and diversity in the marine environment. In this study, we analyzed marine …

Bacterial community compositions and nitrogen metabolism function in a cattle farm wastewater treatment plant revealed by Illumina high-throughput sequencing

W Yan, N Wang, D Wei, C Liang, X Chen, L Liu… - … Science and Pollution …, 2021 - Springer
Bacteria play an important role in pollutant transformation in activated sludge-based
wastewater treatment plants (WWTPs). Exploring the microbial community structure and …