Data-driven prediction in dynamical systems: recent developments

A Ghadami, BI Epureanu - Philosophical Transactions of …, 2022 - royalsocietypublishing.org
In recent years, we have witnessed a significant shift toward ever-more complex and ever-
larger-scale systems in the majority of the grand societal challenges tackled in applied …

Brain entropy, fractal dimensions and predictability: A review of complexity measures for EEG in healthy and neuropsychiatric populations

ZJ Lau, T Pham, SHA Chen… - European Journal of …, 2022 - Wiley Online Library
There has been an increasing trend towards the use of complexity analysis in quantifying
neural activity measured by electroencephalography (EEG) signals. On top of revealing …

Causal inference from cross-sectional earth system data with geographical convergent cross map**

B Gao, J Yang, Z Chen, G Sugihara, M Li… - nature …, 2023 - nature.com
Causal inference in complex systems has been largely promoted by the proposal of some
advanced temporal causation models. However, temporal models have serious limitations …

Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons

N Habib, Y Li, M Heidenreich, L Swiech… - Science, 2016 - science.org
Single-cell RNA sequencing (RNA-Seq) provides rich information about cell types and
states. However, it is difficult to capture rare dynamic processes, such as adult …

Detecting causality in complex ecosystems

G Sugihara, R May, H Ye, C Hsieh, E Deyle, M Fogarty… - science, 2012 - science.org
Identifying causal networks is important for effective policy and management
recommendations on climate, epidemiology, financial regulation, and much else. We …

Beyond experiments

E Diener, R Northcott, MJ Zyphur… - Perspectives on …, 2022 - journals.sagepub.com
It is often claimed that only experiments can support strong causal inferences and therefore
they should be privileged in the behavioral sciences. We disagree. Overvaluing experiments …

Distinguishing time-delayed causal interactions using convergent cross map**

H Ye, ER Deyle, LJ Gilarranz, G Sugihara - Scientific reports, 2015 - nature.com
An important problem across many scientific fields is the identification of causal effects from
observational data alone. Recent methods (convergent cross map**, CCM) have made …

Equation-free mechanistic ecosystem forecasting using empirical dynamic modeling

H Ye, RJ Beamish, SM Glaser… - Proceedings of the …, 2015 - National Acad Sciences
It is well known that current equilibrium-based models fall short as predictive descriptions of
natural ecosystems, and particularly of fisheries systems that exhibit nonlinear dynamics. For …

Data based identification and prediction of nonlinear and complex dynamical systems

WX Wang, YC Lai, C Grebogi - Physics Reports, 2016 - Elsevier
The problem of reconstructing nonlinear and complex dynamical systems from measured
data or time series is central to many scientific disciplines including physical, biological …

Fluctuating interaction network and time-varying stability of a natural fish community

M Ushio, C Hsieh, R Masuda, ER Deyle, H Ye… - Nature, 2018 - nature.com
Ecological theory suggests that large-scale patterns such as community stability can be
influenced by changes in interspecific interactions that arise from the behavioural and/or …