A practical guide to DNA metabarcoding for entomological ecologists
1. DNA metabarcoding is a cost‐effective species identification approach with great potential
to assist entomological ecologists. This review presents a practical guide to help …
to assist entomological ecologists. This review presents a practical guide to help …
Beyond biodiversity: Can environmental DNA (eDNA) cut it as a population genetics tool?
Population genetic data underpin many studies of behavioral, ecological, and evolutionary
processes in wild populations and contribute to effective conservation management …
processes in wild populations and contribute to effective conservation management …
Meta‐analysis shows both congruence and complementarity of DNA and eDNA metabarcoding to traditional methods for biological community assessment
DNA metabarcoding is increasingly used for the assessment of aquatic communities, and
numerous studies have investigated the consistency of this technique with traditional …
numerous studies have investigated the consistency of this technique with traditional …
Toward quantitative metabarcoding
Amplicon‐sequence data from environmental DNA (eDNA) and microbiome studies provide
important information for ecology, conservation, management, and health. At present …
important information for ecology, conservation, management, and health. At present …
Combining ddPCR and environmental DNA to improve detection capabilities of a critically endangered freshwater invertebrate
Isogenus nubecula is a critically endangered Plecoptera species. Considered extinct in the
UK, I. nubecula was recently rediscovered (in one location of the River Dee, Wales), after 22 …
UK, I. nubecula was recently rediscovered (in one location of the River Dee, Wales), after 22 …
[HTML][HTML] Zooplankton biodiversity monitoring in polluted freshwater ecosystems: A technical review
W **ong, X Huang, Y Chen, R Fu, X Du, X Chen… - Environmental Science …, 2020 - Elsevier
Freshwater ecosystems harbor a vast diversity of micro-eukaryotes (rotifers, crustaceans and
protists), and such diverse taxonomic groups play important roles in ecosystem functioning …
protists), and such diverse taxonomic groups play important roles in ecosystem functioning …
Environmental DNA gives comparable results to morphology-based indices of macroinvertebrates in a large-scale ecological assessment
Anthropogenic activities are changing the state of ecosystems worldwide, affecting
community composition and often resulting in loss of biodiversity. Rivers are among the most …
community composition and often resulting in loss of biodiversity. Rivers are among the most …
Assessment of benthic invertebrate diversity and river ecological status along an urbanized gradient using environmental DNA metabarcoding and a traditional survey …
F Ji, D Han, L Yan, S Yan, J Zha, J Shen - Science of the Total Environment, 2022 - Elsevier
Benthic invertebrate diversity is one of the most commonly used bioindicators for assessing
aquatic ecosystem health in river systems. Although an increasing number of studies have …
aquatic ecosystem health in river systems. Although an increasing number of studies have …
Quantification of environmental DNA (eDNA) shedding and decay rates for three commercially harvested fish species and comparison between eDNA detection and …
Stock assessments are critical to inform decisions for sustainable fisheries management.
Environmental DNA (eDNA) analysis is a potential tool for assessing fish biomass and …
Environmental DNA (eDNA) analysis is a potential tool for assessing fish biomass and …
VESPA: an optimized protocol for accurate metabarcoding-based characterization of vertebrate eukaryotic endosymbiont and parasite assemblages
Protocols for characterizing taxonomic assemblages by deep sequencing of short DNA
barcode regions (metabarcoding) have revolutionized our understanding of microbial …
barcode regions (metabarcoding) have revolutionized our understanding of microbial …