The process of structure-based drug design

AC Anderson - Chemistry & biology, 2003 - cell.com
The field of structure-based drug design is a rapidly growing area in which many successes
have occurred in recent years. The explosion of genomic, proteomic, and structural …

Cryogenically cooled probes—a leap in NMR technology

H Kovacs, D Moskau, M Spraul - Progress in Nuclear Magnetic Resonance …, 2005 - Elsevier
During the 50 years of NMR, the technology has renewed itself again and again although
the basic physical principles remain the same. As technical advances and novel materials …

Automated structure determination from NMR spectra

P Güntert - European Biophysics Journal, 2009 - Springer
Automated methods for protein structure determination by NMR have increasingly gained
acceptance and are now widely used for the automated assignment of distance restraints …

Characterization of protein secondary structure from NMR chemical shifts

SP Mielke, VV Krishnan - Progress in nuclear magnetic resonance …, 2009 - Elsevier
Progress in the structural biology of proteins comes from both experimental and theoretical
efforts. Computational methods are capable of delivering fast structural information, ranging …

A topology‐constrained distance network algorithm for protein structure determination from NOESY data

YJ Huang, R Tejero, R Powers… - Proteins: Structure …, 2006 - Wiley Online Library
This article formulates the multidimensional nuclear Overhauser effect spectroscopy
(NOESY) interpretation problem using graph theory and presents a novel, bottom‐up …

Advances in automated NMR protein structure determination

P Guerry, T Herrmann - Quarterly reviews of biophysics, 2011 - cambridge.org
Around half of all protein structures solved nowadays using solution-state nuclear magnetic
resonance (NMR) spectroscopy have been because of automated data analysis. The …

MONTE: An automated Monte Carlo based approach to nuclear magnetic resonance assignment of proteins

TK Hitchens, JA Lukin, Y Zhan, SA McCallum… - Journal of biomolecular …, 2003 - Springer
A general-purpose Monte Carlo assignment program has been developed to aid in the
assignment of NMR resonances from proteins. By virtue of its flexible data requirements the …

Structural proteomics: developments in structure-to-function predictions

M Norin, M Sundström - TRENDS in Biotechnology, 2002 - cell.com
The major challenge for post-genomic research is to functionally assign and validate a large
number of novel target genes and their corresponding proteins. Functional genomics …

A Monte Carlo/simulated annealing algorithm for sequential resonance assignment in solid state NMR of uniformly labeled proteins with magic-angle spinning

R Tycko, KN Hu - Journal of Magnetic Resonance, 2010 - Elsevier
We describe a computational approach to sequential resonance assignment in solid state
NMR studies of uniformly 15N, 13C-labeled proteins with magic-angle spinning. As input …

Exact solutions for internuclear vectors and backbone dihedral angles from NH residual dipolar couplings in two media, and their application in a systematic search …

L Wang, BR Donald - Journal of biomolecular NMR, 2004 - Springer
We have derived a quartic equation for computing the direction of an internuclear vector
from residual dipolar couplings (RDCs) measured in two aligning media, and two simple …