The identification of protein–protein interaction (PPI) sites is essential in the research of
protein function and the discovery of new drugs. So far, a variety of computational tools …

Protein-based therapeutics have revolutionized the pharmaceutical industry and become
vital components in the development of future therapeutics. They offer several advantages …

Numerous cellular functions rely on protein–protein interactions. Efforts to comprehensively
characterize them remain challenged however by the diversity of molecular recognition …

Protein–protein interactions play crucial roles in biological systems. The precise
identification of protein interaction sites is essential for advancing our understanding of …

Enzymatic reaction kinetics are central in analyzing enzymatic reaction mechanisms and
target-enzyme optimization, and thus in biomanufacturing and other industries. The enzyme …

Abstract The 3'untranslated regions (3'UTRs) of messenger RNAs contain many important
cis‐regulatory elements that are under functional and evolutionary constraints. It is …

Protein-DNA interactions play critical roles in various biological processes and are essential
for drug discovery. However, traditional experimental methods are labor-intensive and …

Correct termination of transcription is essential for gene expression. In bacteria, factor-
dependent termination relies on the Rho factor, that classically has three conserved …

Deep learning has become a powerful tool in computational biology, revolutionising the
analysis and interpretation of biological data over time. In our article review, we delve into …

Motivation We explored how explainable artificial intelligence (XAI) can help to shed light
into the inner workings of neural networks for protein function prediction, by extending the …