A review of feature selection methods for machine learning-based disease risk prediction

N Pudjihartono, T Fadason, AW Kempa-Liehr… - Frontiers in …, 2022 - frontiersin.org
Machine learning has shown utility in detecting patterns within large, unstructured, and
complex datasets. One of the promising applications of machine learning is in precision …

Psychiatric genetics and the structure of psychopathology

JW Smoller, OA Andreassen, HJ Edenberg… - Molecular …, 2019 - nature.com
For over a century, psychiatric disorders have been defined by expert opinion and clinical
observation. The modern DSM has relied on a consensus of experts to define categorical …

Analysis of polygenic risk score usage and performance in diverse human populations

L Duncan, H Shen, B Gelaye, J Meijsen… - Nature …, 2019 - nature.com
A historical tendency to use European ancestry samples hinders medical genetics research,
including the use of polygenic scores, which are individual-level metrics of genetic risk. We …

An atlas of genetic scores to predict multi-omic traits

Y Xu, SC Ritchie, Y Liang, PRHJ Timmers, M Pietzner… - Nature, 2023 - nature.com
The use of omic modalities to dissect the molecular underpinnings of common diseases and
traits is becoming increasingly common. But multi-omic traits can be genetically predicted …

Machine learning SNP based prediction for precision medicine

DSW Ho, W Schierding, M Wake, R Saffery… - Frontiers in …, 2019 - frontiersin.org
In the past decade, precision genomics based medicine has emerged to provide tailored
and effective healthcare for patients depending upon their genetic features. Genome Wide …

Machine learning for genetic prediction of psychiatric disorders: a systematic review

M Bracher-Smith, K Crawford, V Escott-Price - Molecular Psychiatry, 2021 - nature.com
Abstract Machine learning methods have been employed to make predictions in psychiatry
from genotypes, with the potential to bring improved prediction of outcomes in psychiatric …

Genomic prediction of breeding values using a subset of SNPs identified by three machine learning methods

B Li, N Zhang, YG Wang, AW George, A Reverter… - Frontiers in …, 2018 - frontiersin.org
The analysis of large genomic data is hampered by issues such as a small number of
observations and a large number of predictive variables (commonly known as “large P small …

Computational models for clinical applications in personalized medicine—guidelines and recommendations for data integration and model validation

CB Collin, T Gebhardt, M Golebiewski… - Journal of personalized …, 2022 - mdpi.com
The future development of personalized medicine depends on a vast exchange of data from
different sources, as well as harmonized integrative analysis of large-scale clinical health …

Association map** in plants in the post-GWAS genomics era

PK Gupta, PL Kulwal, V Jaiswal - Advances in genetics, 2019 - Elsevier
With the availability of DNA-based molecular markers during early 1980s and that of
sophisticated statistical tools in late 1980s and later, it became possible to identify genomic …

Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge …

J Guinney, T Wang, TD Laajala, KK Winner… - The Lancet …, 2017 - thelancet.com
Background Improvements to prognostic models in metastatic castration-resistant prostate
cancer have the potential to augment clinical trial design and guide treatment strategies. In …