Transcription regulation networks control the expression of genes. The transcription
networks of well-studied microorganisms appear to be made up of a small set of recurring …

Microbial networks are an increasingly popular tool to investigate microbial community
structure, as they integrate multiple types of information and may represent systems-level …

Praise for the first edition:… superb, beautifully written and organized work that takes an
engineering approach to systems biology. Alon provides nicely written appendices to …

The mutually beneficial interactions between plants and their animal pollinators and seed
dispersers have been paramount in the generation of Earth's biodiversity. These mutualistic …

Identifying master regulators of biological processes and map** their downstream gene
networks are key challenges in systems biology. We developed a computational method …

Machine learning approaches offer the potential to systematically identify transcriptional
regulatory interactions from a compendium of microarray expression profiles. However …

Current yeast interactome network maps contain several hundred molecular complexes with
limited and somewhat controversial representation of direct binary interactions. We carried …

Closed-loop turbulence control is a critical enabler of aerodynamic drag reduction, lift
increase, mixing enhancement, and noise reduction. Current and future applications have …

A cell's behavior is a consequence of the complex interactions between its numerous
constituents, such as DNA, RNA, proteins and small molecules. Cells use signaling …

Organisms are constantly exposed to a wide range of environmental changes, including
both short-term changes during their lifetime and longer-term changes across generations …