Current understanding of the pathways of flavonoid biosynthesis in model and crop plants
T Tohge, LP de Souza, AR Fernie - Journal of experimental …, 2017 - academic.oup.com
Flavonoids are a signature class of secondary metabolites formed from a relatively simple
collection of scaffolds. They are extensively decorated by chemical reactions including …
collection of scaffolds. They are extensively decorated by chemical reactions including …
ROS signaling: the new wave?
R Mittler, S Vanderauwera, N Suzuki, GAD Miller… - Trends in plant …, 2011 - cell.com
Reactive oxygen species (ROS) play a multitude of signaling roles in different organisms
from bacteria to mammalian cells. They were initially thought to be toxic byproducts of …
from bacteria to mammalian cells. They were initially thought to be toxic byproducts of …
PLAZA 5.0: extending the scope and power of comparative and functional genomics in plants
PLAZA is a platform for comparative, evolutionary, and functional plant genomics. It makes a
broad set of genomes, data types and analysis tools available to researchers through a user …
broad set of genomes, data types and analysis tools available to researchers through a user …
PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics
Abstract PLAZA (https://bioinformatics. psb. ugent. be/plaza) is a plant-oriented online
resource for comparative, evolutionary and functional genomics. The PLAZA platform …
resource for comparative, evolutionary and functional genomics. The PLAZA platform …
Ancestral polyploidy in seed plants and angiosperms
Abstract Whole-genome duplication (WGD), or polyploidy, followed by gene loss and
diploidization has long been recognized as an important evolutionary force in animals, fungi …
diploidization has long been recognized as an important evolutionary force in animals, fungi …
Phytozome: a comparative platform for green plant genomics
DM Goodstein, S Shu, R Howson… - Nucleic acids …, 2012 - academic.oup.com
The number of sequenced plant genomes and associated genomic resources is growing
rapidly with the advent of both an increased focus on plant genomics from funding agencies …
rapidly with the advent of both an increased focus on plant genomics from funding agencies …
Phylogeny and molecular evolution of the green algae
F Leliaert, DR Smith, H Moreau… - Critical reviews in …, 2012 - Taylor & Francis
The green lineage (Viridiplantae) comprises the green algae and their descendants the land
plants, and is one of the major groups of oxygenic photosynthetic eukaryotes. Current …
plants, and is one of the major groups of oxygenic photosynthetic eukaryotes. Current …
Charting plant gene functions in the multi-omics and single-cell era
T Depuydt, B De Rybel, K Vandepoele - Trends in Plant Science, 2023 - cell.com
Despite the increased access to high-quality plant genome sequences, the set of genes with
a known function remains far from complete. With the advent of novel bulk and single-cell …
a known function remains far from complete. With the advent of novel bulk and single-cell …
PLAZA 3.0: an access point for plant comparative genomics
Comparative sequence analysis has significantly altered our view on the complexity of
genome organization and gene functions in different kingdoms. PLAZA 3.0 is designed to …
genome organization and gene functions in different kingdoms. PLAZA 3.0 is designed to …
The genome sequence of the orchid Phalaenopsis equestris
Orchidaceae, renowned for its spectacular flowers and other reproductive and ecological
adaptations, is one of the most diverse plant families. Here we present the genome …
adaptations, is one of the most diverse plant families. Here we present the genome …