Genome-editing technologies: principles and applications

T Gaj, SJ Sirk, S Shui, J Liu - Cold Spring Harbor …, 2016 - cshperspectives.cshlp.org
Targeted nucleases have provided researchers with the ability to manipulate virtually any
genomic sequence, enabling the facile creation of isogenic cell lines and animal models for …

Programmable deletion, replacement, integration and inversion of large DNA sequences with twin prime editing

AV Anzalone, XD Gao, CJ Podracky, AT Nelson… - Nature …, 2022 - nature.com
The targeted deletion, replacement, integration or inversion of genomic sequences could be
used to study or treat human genetic diseases, but existing methods typically require double …

Synthetic zinc finger proteins: the advent of targeted gene regulation and genome modification technologies

CA Gersbach, T Gaj, CF Barbas III - Accounts of chemical …, 2014 - ACS Publications
Conspectus The understanding of gene regulation and the structure and function of the
human genome increased dramatically at the end of the 20th century. Yet the technologies …

A programmable Cas9-serine recombinase fusion protein that operates on DNA sequences in mammalian cells

B Chaikind, JL Bessen, DB Thompson… - Nucleic acids …, 2016 - academic.oup.com
We describe the development of 'recCas9', an RNA-programmed small serine recombinase
that functions in mammalian cells. We fused a catalytically inactive dCas9 to the catalytic …

Formation of functional super-helical assemblies by constrained single heptad repeat

S Mondal, L Adler-Abramovich, A Lampel… - Nature …, 2015 - nature.com
Inspired by the key role of super-helical motifs in molecular self-organization, several
tandem heptad repeat peptides were used as building blocks to form well-ordered …

Engineering altered protein–DNA recognition specificity

AJ Bogdanove, A Bohm, JC Miller… - Nucleic Acids …, 2018 - academic.oup.com
Protein engineering is used to generate novel protein folds and assemblages, to impart new
properties and functions onto existing proteins, and to enhance our understanding of …

Beyond editing to writing large genomes

R Chari, GM Church - Nature Reviews Genetics, 2017 - nature.com
Recent exponential advances in genome sequencing and engineering technologies have
enabled an unprecedented level of interrogation into the impact of DNA variation (genotype) …

Protein Delivery Using Cys2–His2 Zinc-Finger Domains

T Gaj, J Liu, KE Anderson, SJ Sirk… - ACS chemical …, 2014 - ACS Publications
The development of new methods for delivering proteins into cells is a central challenge for
advancing both basic research and therapeutic applications. We previously reported that …

Molecular crowding evolution for enabling discovery of enthalpy-driven aptamers for robust biomedical applications

M Huang, J Song, P Huang, X Chen, W Wang… - Analytical …, 2019 - ACS Publications
An enthalpy-driven ligand is an ideal probe for practical applications because of the
formation of abundant specific bonds between the ligand and target, compared to an entropy …

Use of zinc-finger nucleases for crop improvement

JP Davies, S Kumar, L Sastry-Dent - Progress in molecular biology and …, 2017 - Elsevier
Over the past two decades, new technologies enabling targeted modification of plant
genomes have been developed. Among these are zinc-finger nucleases (ZFNs) which are …