Diversity within species: interpreting strains in microbiomes

T Van Rossum, P Ferretti, OM Maistrenko… - Nature Reviews …, 2020 - nature.com
Studying within-species variation has traditionally been limited to culturable bacterial
isolates and low-resolution microbial community fingerprinting. Metagenomic sequencing …

Return of the Lemnaceae: duckweed as a model plant system in the genomics and postgenomics era

K Acosta, KJ Appenroth, L Borisjuk, M Edelman… - The Plant …, 2021 - academic.oup.com
The aquatic Lemnaceae family, commonly called duckweed, comprises some of the smallest
and fastest growing angiosperms known on Earth. Their tiny size, rapid growth by clonal …

Deciphering factors driving soil microbial life‐history strategies in restored grasslands

Y Yang, Y Dou, B Wang, Z Xue, Y Wang, S An… - Imeta, 2023 - Wiley Online Library
In macroecology, the concept of r‐and K‐strategy has been widely applied, yet, there have
been limited studies on microbial life‐history strategies in temperate grasslands using …

Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant

O Shalev, TL Karasov, DS Lundberg… - Nature ecology & …, 2022 - nature.com
The community structure in the plant-associated microbiome depends collectively on host–
microbe, microbe–microbe and host–microbe–microbe interactions. The ensemble of …

Competition, Nodule Occupancy, and Persistence of Inoculant Strains: Key Factors in the Rhizobium-Legume Symbioses

M Mendoza-Suárez, SU Andersen, PS Poole… - Frontiers in plant …, 2021 - frontiersin.org
Biological nitrogen fixation by Rhizobium-legume symbioses represents an environmentally
friendly and inexpensive alternative to the use of chemical nitrogen fertilizers in legume …

Experimental evolution makes microbes more cooperative with their local host genotype

RT Batstone, AM O'Brien, TL Harrison… - Science, 2020 - science.org
Advances in microbiome science require a better understanding of how beneficial microbes
adapt to hosts. We tested whether hosts select for more-cooperative microbial strains with a …

Soil origin and plant genotype structure distinct microbiome compartments in the model legume Medicago truncatula

SP Brown, MA Grillo, JC Podowski, KD Heath - Microbiome, 2020 - Springer
Background Understanding the genetic and environmental factors that structure plant
microbiomes is necessary for leveraging these interactions to address critical needs in …

Agriculture and the disruption of plant–microbial symbiosis

SS Porter, JL Sachs - Trends in Ecology & Evolution, 2020 - cell.com
Domestication has transformed hundreds of wild plant species into productive cultivars for
human utility. However, cultivation practices and intense artificial selection for yield may …

Rhizobial–host interactions and symbiotic nitrogen fixation in legume crops toward agriculture sustainability

RK Goyal, AK Mattoo, MA Schmidt - Frontiers in Microbiology, 2021 - frontiersin.org
Symbiotic nitrogen fixation (SNF) process makes legume crops self-sufficient in nitrogen (N)
in sharp contrast to cereal crops that require an external input by N-fertilizers. Since the latter …

When spring ephemerals fail to meet pollinators: mechanism of phenological mismatch and its impact on plant reproduction

G Kudo, EJ Cooper - Proceedings of the Royal Society B, 2019 - royalsocietypublishing.org
The flowering phenology of early-blooming plants is largely determined by snowmelt timing
in high-latitude and high-altitude ecosystems. When the synchrony of flowering and …