Conceptual and empirical bridges between micro-and macroevolution

J Rolland, LF Henao-Diaz, M Doebeli… - Nature Ecology & …, 2023 - nature.com
Explaining broad molecular, phenotypic and species biodiversity patterns necessitates a
unifying framework spanning multiple evolutionary scales. Here we argue that although …

The role of the uplift of the Qinghai‐Tibetan Plateau for the evolution of Tibetan biotas

A Favre, M Päckert, SU Pauls, SC Jähnig… - Biological …, 2015 - Wiley Online Library
Biodiversity is unevenly distributed on Earth and hotspots of biodiversity are often
associated with areas that have undergone orogenic activity during recent geological history …

phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things)

LJ Revell - PeerJ, 2024 - peerj.com
Phylogenetic comparative methods comprise the general endeavor of using an estimated
phylogenetic tree (or set of trees) to make secondary inferences: about trait evolution …

Ancient orogenic and monsoon-driven assembly of the world's richest temperate alpine flora

WN Ding, RH Ree, RA Spicer, YW **ng - Science, 2020 - science.org
Origins of an alpine flora The evolution of high mountain floras is strongly influenced by
tectonic and climatic history. Ding et al. document the timing, tempo, and mode by which the …

Conceptual and statistical problems with the DEC+ J model of founder‐event speciation and its comparison with DEC via model selection

RH Ree, I Sanmartín - Journal of Biogeography, 2018 - Wiley Online Library
Phylogenetic studies of geographic range evolution are increasingly using statistical model
selection methods to choose among variants of the dispersal‐extinction‐cladogenesis …

Model selection in historical biogeography reveals that founder-event speciation is a crucial process in island clades

NJ Matzke - Systematic biology, 2014 - academic.oup.com
Founder-event speciation, where a rare jump dispersal event founds a new genetically
isolated lineage, has long been considered crucial by many historical biogeographers, but …

Impact of whole‐genome duplication events on diversification rates in angiosperms

JB Landis, DE Soltis, Z Li, HE Marx… - American journal of …, 2018 - Wiley Online Library
Premise of the Study Polyploidy or whole‐genome duplication (WGD) pervades the
evolutionary history of angiosperms. Despite extensive progress in our understanding of …

Detecting hidden diversification shifts in models of trait-dependent speciation and extinction

JM Beaulieu, BC O'Meara - Systematic biology, 2016 - academic.oup.com
The distribution of diversity can vary considerably from clade to clade. Attempts to
understand these patterns often employ state-dependent speciation and extinction models …

[KİTAP][B] Probabilistic historical biogeography: new models for founder-event speciation, imperfect detection, and fossils allow improved accuracy and model-testing

NJ Matzke - 2013 - search.proquest.com
Historical biogeography has a diversity of methods for inferring ancestral geographic ranges
on phylogenies, but many of the methods have conflicting assumptions, and there is no …

Diversitree: comparative phylogenetic analyses of diversification in R

RG FitzJohn - Methods in Ecology and Evolution, 2012 - Wiley Online Library
The R package 'diversitree'contains a number of classical and contemporary comparative
phylogenetic methods. Key included methods are BiSSE (binary state speciation and …