[PDF][PDF] Deep learning in population genetics

K Korfmann, OE Gaggiotti… - Genome Biology and …, 2023 - academic.oup.com
Population genetics is transitioning into a data-driven discipline thanks to the availability of
large-scale genomic data and the need to study increasingly complex evolutionary …

Trajectory of livestock genomics in South Asia: a comprehensive review

M Panigrahi, H Kumar, KA Saravanan, D Rajawat… - Gene, 2022 - Elsevier
Livestock plays a central role in sustaining human livelihood in South Asia. There are
numerous and distinct livestock species in South Asian countries. Several of them have …

Comprehensive selection signature analyses in dairy cattle exploiting purebred and crossbred genomic data

SS Nayak, M Panigrahi, D Rajawat, K Ghildiyal… - Mammalian …, 2023 - Springer
The main objective of the current research was to locate, annotate, and highlight specific
areas of the bovine genome that are undergoing intense positive selection. Here, we are …

Landmarks in the history of selective sweeps

M Panigrahi, D Rajawat, SS Nayak, K Ghildiyal… - Animal …, 2023 - Wiley Online Library
Half a century ago, a seminal article on the hitchhiking effect by Smith and Haigh
inaugurated the concept of the selection signature. Selective sweeps are characterised by …

Uncovering genes underlying coat color variation in indigenous cattle breeds through genome-wide positive selection

D Rajawat, M Panigrahi, SS Nayak… - Animal …, 2023 - Taylor & Francis
The identification of candidate genes related to pigmentation and under selective sweep
provides insights into the genetic basis of pigmentation and the evolutionary forces that have …

Evidence for selective sweeps in the MHC gene repertoire of various cattle breeds

SS Nayak, M Panigrahi, H Kumar, D Rajawat… - Animal …, 2023 - Taylor & Francis
Abstract Major Histocompatibility Complex (MHC) genes are among the immune genes that
have been extensively studied in vertebrates and are necessary for adaptive immunity. In …

Signatures of selection in riverine buffalo populations revealed by genome-wide SNP data

KA Saravanan, D Rajawat, H Kumar… - Animal …, 2023 - Taylor & Francis
The detection of selection signatures assists in understanding domestication, evolution, and
the identification of genomic regions related to adaptation and production traits in buffaloes …

Deciphering climate resilience in Indian cattle breeds by selection signature analyses

SS Nayak, M Panigrahi, D Rajawat, K Ghildiyal… - Tropical Animal Health …, 2024 - Springer
The signature of selection is a crucial concept in evolutionary biology that refers to the
pattern of genetic variation which arises in a population due to natural selection. In the …

Dissecting the genomic regions of selection on the X chromosome in different cattle breeds

D Rajawat, M Panigrahi, SS Nayak, B Bhushan… - 3 Biotech, 2024 - Springer
Mammalian X and Y chromosomes independently evolved from various autosomes
approximately 300 million years ago (MYA). To fully understand the relationship between …

[HTML][HTML] Applications of Artificial Intelligence for Heat Stress Management in Ruminant Livestock

EB Rebez, V Sejian, MV Silpa, G Kalaignazhal… - Sensors, 2024 - mdpi.com
Heat stress impacts ruminant livestock production on varied levels in this alarming climate
breakdown scenario. The drastic effects of the global climate change-associated heat stress …