Discrete Bayesian network classifiers: A survey

C Bielza, P Larranaga - ACM Computing Surveys (CSUR), 2014 - dl.acm.org
We have had to wait over 30 years since the naive Bayes model was first introduced in 1960
for the so-called Bayesian network classifiers to resurge. Based on Bayesian networks …

A review of ensemble methods in bioinformatics

P Yang, Y Hwa Yang, BB Zhou… - Current …, 2010 - ingentaconnect.com
Ensemble learning is an intensively studied technique in machine learning and pattern
recognition. Recent work in computational biology has seen an increasing use of ensemble …

[LIBRO][B] Bayesian networks: a practical guide to applications

O Pourret, P Na, B Marcot - 2008 - books.google.com
Bayesian Networks, the result of the convergence of artificial intelligence with statistics, are
growing in popularity. Their versatility and modelling power is now employed across a …

A review on evolutionary algorithms in Bayesian network learning and inference tasks

P Larranaga, H Karshenas, C Bielza, R Santana - Information Sciences, 2013 - Elsevier
Thanks to their inherent properties, probabilistic graphical models are one of the prime
candidates for machine learning and decision making tasks especially in uncertain domains …

Estimation of distribution algorithms in machine learning: a survey

P Larrañaga, C Bielza - IEEE transactions on evolutionary …, 2023 - ieeexplore.ieee.org
The automatic induction of machine learning models capable of addressing supervised
learning, feature selection, clustering, and reinforcement learning problems requires …

Machine learning for predicting protein properties: A comprehensive review

Y Wang, Y Zhang, X Zhan, Y He, Y Yang, L Cheng… - Neurocomputing, 2024 - Elsevier
In the field of protein engineering, the function and structure of proteins are key to
understanding cellular mechanisms, biological evolution, and biodiversity. With the …

YASSPP: better kernels and coding schemes lead to improvements in protein secondary structure prediction

G Karypis - Proteins: Structure, Function, and Bioinformatics, 2006 - Wiley Online Library
The accurate prediction of a protein's secondary structure plays an increasingly critical role
in predicting its function and tertiary structure, as it is utilized by many of the current state‐of …

Hierarchical ensemble methods for protein function prediction

G Valentini - International Scholarly Research Notices, 2014 - Wiley Online Library
Protein function prediction is a complex multiclass multilabel classification problem,
characterized by multiple issues such as the incompleteness of the available annotations …

Discrimination of outer membrane proteins using machine learning algorithms

MM Gromiha, M Suwa - PROTEINS: Structure, Function, and …, 2006 - Wiley Online Library
Discriminating outer membrane proteins (OMPs) from other folding types of globular and
membrane proteins is an important task both for identifying OMPs from genomic sequences …

Predicting protein secondary structure using a mixed-modal SVM method in a compound pyramid model

B Yang, Q Wu, Z Ying, H Sui - Knowledge-Based Systems, 2011 - Elsevier
Accurate protein secondary structure prediction plays an important role in direct tertiary
structure modeling, and can also significantly improve sequence analysis and sequence …