gllvm: Fast analysis of multivariate abundance data with generalized linear latent variable models in r

J Niku, FKC Hui, S Taskinen… - Methods in Ecology and …, 2019 - Wiley Online Library
There has been rapid development in tools for multivariate analysis based on fully specified
statistical models or 'joint models'. One approach attracting a lot of attention is generalized …

Four principles for improved statistical ecology

G Popovic, TJ Mason, SM Drobniak… - Methods in Ecology …, 2024 - Wiley Online Library
Increasing attention has been drawn to the misuse of statistical methods over recent years,
with particular concern about the prevalence of practices such as poor experimental design …

A Review of Generalized Linear Latent Variable Models and Related Computational Approaches

P Korhonen, K Nordhausen… - Wiley Interdisciplinary …, 2024 - Wiley Online Library
Generalized linear latent variable models (GLLVMs) have become mainstream models in
this analysis of correlated, m‐dimensional data. GLLVMs can be seen as a reduced‐rank …

Ocean warming undermines the recovery resilience of N ew E ngland kelp forests following a fishery‐induced trophic cascade

TS Suskiewicz, JEK Byrnes, RS Steneck, R Russell… - Ecology, 2024 - Wiley Online Library
Ecological theory predicts that kelp forests structured by trophic cascades should experience
recovery and persistence of their foundation species when herbivores become rare. Yet …

A new joint species distribution model for faster and more accurate inference of species associations from big community data

M Pichler, F Hartig - Methods in Ecology and Evolution, 2021 - Wiley Online Library
Joint species distribution models (JSDMs) explain spatial variation in community
composition by contributions of the environment, biotic associations and possibly spatially …

Many cameras make light work: opportunistic photographs of rare species in iNaturalist complement structured surveys of reef fish to better understand species …

CJ Roberts, A Vergés, CT Callaghan… - Biodiversity and …, 2022 - Springer
Citizen science is on the rise, with growing numbers of initiatives, participants and
increasing interest from the broader scientific community. iNaturalist is an example of a …

A comparison of joint species distribution models for percent cover data

P Korhonen, FKC Hui, J Niku… - Methods in Ecology …, 2024 - Wiley Online Library
Joint species distribution models (JSDMs) have gained considerable traction among
ecologists over the past decade, due to their capacity to answer a wide range of questions at …

Inconsistent response of taxonomic groups to space and environment in mediterranean and tropical pond metacommunities

Á Gálvez, PR Peres‐Neto, A Castillo‐Escrivà… - Ecology, 2023 - Wiley Online Library
The metacommunity concept provides a theoretical framework that aims at explaining
organism distributions by a combination of environmental filtering, dispersal, and drift …

Environmental controls on butterfly occurrence and species richness in Israel: The importance of temperature over rainfall

O Comay, O Ben Yehuda… - Ecology and …, 2021 - Wiley Online Library
Butterflies are considered important indicators representing the state of biodiversity and key
ecosystem functions, but their use as bioindicators requires a better understanding of how …

Taxonomic and functional patterns of benthic communities in southern temperate tidal flats

O Lam-Gordillo, R Baring, S Dittmann - Frontiers in Marine Science, 2021 - frontiersin.org
Coastal ecosystems are vulnerable to anthropogenic disturbances which can cause loss of
benthic macrofauna and their ecosystem functioning. Despite the importance of functional …