De Novo Genes

L Zhao, N Svetec, DJ Begun - Annual Review of Genetics, 2024 - annualreviews.org
Although the majority of annotated new genes in a given genome appear to have arisen
from duplication-related mechanisms, recent studies have shown that genes can also …

[HTML][HTML] Reframing research on evolutionary novelty and co-option: Character identity mechanisms versus deep homology

J DiFrisco, GP Wagner, AC Love - Seminars in Cell & Developmental …, 2023 - Elsevier
A central topic in research at the intersection of development and evolution is the origin of
novel traits. Despite progress on understanding how developmental mechanisms underlie …

Butterfly eyespots evolved via cooption of an ancestral gene-regulatory network that also patterns antennae, legs, and wings

SN Murugesan, H Connahs… - Proceedings of the …, 2022 - National Acad Sciences
Butterfly eyespots are beautiful novel traits with an unknown developmental origin. Here we
show that eyespots likely originated via cooption of parts of an ancestral appendage gene …

DrosoPhyla: resources for drosophilid phylogeny and systematics

C Finet, VA Kassner, AB Carvalho… - Genome biology and …, 2021 - academic.oup.com
The vinegar fly Drosophila melanogaster is a pivotal model for invertebrate development,
genetics, physiology, neuroscience, and disease. The whole family Drosophilidae, which …

Co-option of the trichome-forming network initiated the evolution of a morphological novelty in Drosophila eugracilis

G Rice, T Gaitán-Escudero, K Charles-Obi, J Zeitlinger… - Current Biology, 2024 - cell.com
Identifying the molecular origins by which new morphological structures evolve is one of the
long-standing problems in evolutionary biology. To date, vanishingly few examples provide …

A conceptual framework of evolutionary novelty and innovation

DH Erwin - Biological Reviews, 2021 - Wiley Online Library
Since 1990 the recognition of deep homologies among metazoan developmental processes
and the spread of more mechanistic approaches to developmental biology have led to a …

Taxon-restricted genes at the origin of a novel trait allowing access to a new environment

ME Santos, A Le Bouquin, AJJ Crumière, A Khila - Science, 2017 - science.org
Taxon-restricted genes make up a considerable proportion of genomes, yet their
contribution to phenotypic evolution is poorly understood. We combined gene expression …

Enhancer evolution and the origins of morphological novelty

M Rebeiz, M Tsiantis - Current Opinion in Genetics & Development, 2017 - Elsevier
Highlights•Genome-wide and single gene studies have revealed a variety of mechanisms by
which new expression patterns arise.•Studying newly evolved morphologies at the level of …

Co-option of stress mechanisms in the origin of evolutionary novelties

AC Love, GP Wagner - Evolution, 2022 - academic.oup.com
It is widely accepted that stressful conditions can facilitate evolutionary change. The
mechanisms elucidated thus far accomplish this with a generic increase in heritable …

Co-option of wing-patterning genes underlies the evolution of the treehopper helmet

CR Fisher, JL Wegrzyn, EL Jockusch - Nature Ecology & Evolution, 2020 - nature.com
Understanding the origin of novelty is a key question in evolutionary developmental biology.
In arthropods, the body wall has served as a repeated source of morphological novelty. In …