The selection and function of cell type-specific enhancers
The human body contains several hundred cell types, all of which share the same genome.
In metazoans, much of the regulatory code that drives cell type-specific gene expression is …
In metazoans, much of the regulatory code that drives cell type-specific gene expression is …
Chromatin accessibility profiling methods
Chromatin accessibility, or the physical access to chromatinized DNA, is a widely studied
characteristic of the eukaryotic genome. As active regulatory DNA elements are generally …
characteristic of the eukaryotic genome. As active regulatory DNA elements are generally …
EnhancerAtlas 2.0: an updated resource with enhancer annotation in 586 tissue/cell types across nine species
Enhancers are distal cis-regulatory elements that activate the transcription of their target
genes. They regulate a wide range of important biological functions and processes …
genes. They regulate a wide range of important biological functions and processes …
[HTML][HTML] A high-resolution map of human enhancer RNA loci characterizes super-enhancer activities in cancer
Although enhancers play critical roles in cancer, quantifying enhancer activities in clinical
samples remains challenging, especially for super-enhancers. Enhancer activities can be …
samples remains challenging, especially for super-enhancers. Enhancer activities can be …
MNase titration reveals differences between nucleosome occupancy and chromatin accessibility
Chromatin accessibility plays a fundamental role in gene regulation. Nucleosome
placement, usually measured by quantifying protection of DNA from enzymatic digestion …
placement, usually measured by quantifying protection of DNA from enzymatic digestion …
Genomic methods in profiling DNA accessibility and factor localization
Recent advancements in next-generation sequencing technologies and accompanying
reductions in cost have led to an explosion of techniques to examine DNA accessibility and …
reductions in cost have led to an explosion of techniques to examine DNA accessibility and …
Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans
Chromatin accessibility, a crucial component of genome regulation, has primarily been
studied in homogeneous and simple systems, such as isolated cell populations or early …
studied in homogeneous and simple systems, such as isolated cell populations or early …
Brd4's bromodomains mediate histone H3 acetylation and chromatin remodeling in pluripotent cells through P300 and Brg1
T Wu, YF Kamikawa, ME Donohoe - Cell reports, 2018 - cell.com
The pluripotent state of embryonic stem cells (ESCs) is defined by its transcriptome and
epigenome. The chromatin reader Brd4 determines ESC identity. Although Brd4 regulation …
epigenome. The chromatin reader Brd4 determines ESC identity. Although Brd4 regulation …