Optobiochemistry: Genetically encoded control of protein activity by light

J Seong, MZ Lin - Annual review of biochemistry, 2021 - annualreviews.org
Optobiochemical control of protein activities allows the investigation of protein functions in
living cells with high spatiotemporal resolution. Over the last two decades, numerous natural …

Sequence‐Specific DNA Recognition with Designed Peptides

S Boga, D Bouzada, D Garcia Pena… - European journal of …, 2018 - Wiley Online Library
Inspired by natural transcription factors (TFs), researchers have explored the potential of
artificial peptides for the recognition of specific DNA sequences, develo** increasingly …

A yeast system for discovering optogenetic inhibitors of eukaryotic translation initiation

H Lu, M Mazumder, ASI Jaikaran, A Kumar… - ACS synthetic …, 2019 - ACS Publications
The precise spatiotemporal regulation of protein synthesis is essential for many complex
biological processes such as memory formation, embryonic development, and tumor …

Excitation-Wavelength-Dependent Photocycle Initiation Dynamics Resolve Heterogeneity in the Photoactive Yellow Protein from Halorhodospira halophila

LT Mix, EC Carroll, D Morozov, J Pan, WR Gordon… - Biochemistry, 2018 - ACS Publications
Photoactive yellow proteins (PYPs) make up a diverse class of blue-light-absorbing bacterial
photoreceptors. Electronic excitation of the p-coumaric acid chromophore covalently bound …

Investigations of human myosin VI targeting using optogenetically controlled cargo loading

AR French, TR Sosnick, RS Rock - … of the National Academy of Sciences, 2017 - pnas.org
Myosins play countless critical roles in the cell, each requiring it to be activated at a specific
location and time. To control myosin VI with this specificity, we created an optogenetic tool …

Detection of Incorporation of p-Coumaric Acid into Photoactive Yellow Protein Variants in Vivo

KE Brechun, D Zhen, A Jaikaran, V Borisenko… - Biochemistry, 2019 - ACS Publications
We report the design and characterization of photoactive yellow protein (PYP)–blue
fluorescent protein (mTagBFP) fusion constructs that permit the direct assay of reconstitution …

Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms

MG Romei, CY Lin, SG Boxer - Journal of Photochemistry and Photobiology …, 2020 - Elsevier
Photo-induced structural rearrangements of chromophore-containing proteins are essential
for various light-dependent signaling pathways and optogenetic applications. Ultrafast …

Development of an Engineered Photoactive Yellow Protein as a Cross‐Linking Junction for Construction of Photoresponsive Protein‐Polymer Conjugates

M Ui, Y Miyauchi, M Inoue, M Murakami… - …, 2019 - Wiley Online Library
Based on a bacterial blue light photoreceptor, photoactive yellow protein (PYP), we have
developed a photoresponsive protein module, Hpg5‐PYP, bearing five alkynyl groups as …

[책][B] Diversity in the Photodynamics of the Photoactive Yellow Protein Family

LT Mix - 2018 - search.proquest.com
Photoreceptors control biological functions by harnessing changes in the chemical structure
of the protein in response to light. The Photoactive Yellow Protein (PYP) family of …

[책][B] Controlling Color and Photoisomerization Pathways in Photoactive Proteins: The Role of the Protein Environment

MG Romei - 2020 - search.proquest.com
Proteins are a remarkable class of macromolecules. With a limited number of building
blocks, amino acids, they adopt an incredible diversity of three dimensional structures, each …