Genetic aspects of mitochondrial genome evolution

M Bernt, A Braband, B Schierwater… - Molecular phylogenetics …, 2013 - Elsevier
Many years of extensive studies of metazoan mitochondrial genomes have established
differences in gene arrangements and genetic codes as valuable phylogenetic markers …

Recent advances in understanding mitochondrial genome diversity

R Zardoya - F1000Research, 2020 - pmc.ncbi.nlm.nih.gov
Ever since its discovery, the double-stranded DNA contained in the mitochondria of
eukaryotes has fascinated researchers because of its bacterial endosymbiotic origin, crucial …

tRNAscan-SE 2.0: improved detection and functional classification of transfer RNA genes

PP Chan, BY Lin, AJ Mak, TM Lowe - Nucleic acids research, 2021 - academic.oup.com
Abstract tRNAscan-SE has been widely used for transfer RNA (tRNA) gene prediction for
over twenty years, developed just as the first genomes were decoded. With the massive …

MITOS: improved de novo metazoan mitochondrial genome annotation

M Bernt, A Donath, F Jühling, F Externbrink… - Molecular phylogenetics …, 2013 - Elsevier
About 2000 completely sequenced mitochondrial genomes are available from the NCBI
RefSeq data base together with manually curated annotations of their protein-coding genes …

Structure and variation of the mitochondrial genome of fishes

TP Satoh, M Miya, K Mabuchi, M Nishida - BMC genomics, 2016 - Springer
Background The mitochondrial (mt) genome has been used as an effective tool for
phylogenetic and population genetic analyses in vertebrates. However, the structure and …

Initial detections and spread of invasive Spodoptera frugiperda in China and comparisons with other noctuid larvae in cornfields using molecular techniques

DP **g, JF Guo, YY Jiang, JZ Zhao, A Sethi… - Insect …, 2020 - Wiley Online Library
The fall armyworm, Spodoptera frugiperda, is a species native to the Americas and has
spread to many countries in Africa and Asia in recent years. Proactive actions for potential …

Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome …

F Jühling, J Pütz, M Bernt, A Donath… - Nucleic acids …, 2012 - academic.oup.com
Transfer RNAs (tRNAs) are present in all types of cells as well as in organelles. tRNAs of
animal mitochondria show a low level of primary sequence conservation and exhibit …

A mitochondrial genome phylogeny of voles and lemmings (Rodentia: Arvicolinae): Evolutionary and taxonomic implications

NI Abramson, SY Bodrov, OV Bondareva… - PLoS …, 2021 - journals.plos.org
Arvicolinae is one of the most impressive placental radiations with over 150 extant and
numerous extinct species that emerged since the Miocene in the Northern Hemisphere. The …

Efficient sequencing of anuran mtDNAs and a mitogenomic exploration of the phylogeny and evolution of frogs

P Zhang, D Liang, RL Mao, DM Hillis… - Molecular Biology …, 2013 - academic.oup.com
Anura (frogs and toads) constitute over 88% of living amphibian diversity but many important
questions about their phylogeny and evolution remain unresolved. For this study, we …

Comparative and phylogenomic studies on the mitochondrial genomes of Pentatomomorpha (Insecta: Hemiptera: Heteroptera)

J Hua, M Li, P Dong, Y Cui, Q **e, W Bu - BMC genomics, 2008 - Springer
Background Nucleotide sequences and the gene arrangements of mitochondrial genomes
are effective tools for resolving phylogenetic problems. Hemipteroid insects are known to …