[HTML][HTML] Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

TO Delmont, M Gaia, DD Hinsinger, P Frémont… - Cell Genomics, 2022 - cell.com
Marine planktonic eukaryotes play critical roles in global biogeochemical cycles and climate.
However, their poor representation in culture collections limits our understanding of the …

Single-virus genomics and beyond

J Martínez Martínez, F Martinez-Hernandez… - Nature Reviews …, 2020 - nature.com
Viruses are extremely diverse and modulate important biological and ecological processes
globally. However, much of viral diversity remains uncultured and yet to be discovered …

Leveraging single-cell genomics to expand the fungal tree of life

SR Ahrendt, CA Quandt, D Ciobanu, A Clum… - Nature …, 2018 - nature.com
Environmental DNA surveys reveal that most fungal diversity represents uncultured species.
We sequenced the genomes of eight uncultured species across the fungal tree of life using a …

Using single-cell transcriptomics to understand functional states and interactions in microbial eukaryotes

C Ku, A Sebé-Pedrós - Philosophical Transactions of the …, 2019 - royalsocietypublishing.org
Understanding the diversity and evolution of eukaryotic microorganisms remains one of the
major challenges of modern biology. In recent years, we have advanced in the discovery …

Phylogenomics of Endogonaceae and evolution of mycorrhizas within Mucoromycota

Y Chang, A Desirò, H Na, L Sandor, A Lipzen… - New …, 2019 - Wiley Online Library
Summary Endogonales (Mucoromycotina), composed of Endogonaceae and
Densosporaceae, is the only known non‐Dikarya order with ectomycorrhizal members. They …

Reconstruction of protein domain evolution using single-cell amplified genomes of uncultured choanoflagellates sheds light on the origin of animals

D López-Escardó, X Grau-Bové… - … of the Royal …, 2019 - royalsocietypublishing.org
Understanding the origins of animal multicellularity is a fundamental biological question.
Recent genome data have unravelled the role that co-option of pre-existing genes played in …

Single cell genomics yields a wide diversity of small planktonic protists across major ocean ecosystems

ME Sieracki, NJ Poulton, O Jaillon, P Wincker… - Scientific reports, 2019 - nature.com
Marine planktonic protists are critical components of ocean ecosystems and are highly
diverse. Molecular sequencing methods are being used to describe this diversity and reveal …

Comparative genomics reveals new functional insights in uncultured MAST species

A Labarre, D López-Escardó, F Latorre… - The ISME …, 2021 - academic.oup.com
Heterotrophic lineages of stramenopiles exhibit enormous diversity in morphology, lifestyle,
and habitat. Among them, the marine stramenopiles (MASTs) represent numerous …

Combining morphology, behaviour and genomics to understand the evolution and ecology of microbial eukaryotes

PJ Keeling - … Transactions of the Royal Society B, 2019 - royalsocietypublishing.org
Microbial eukaryotes (protists) are structurally, developmentally and behaviourally more
complex than their prokaryotic cousins. This complexity makes it more difficult to translate …

Structure and evolution of diatom nuclear genes and genomes

T Mock, K Hodgkinson, T Wu, V Moulton… - The molecular life of …, 2022 - Springer
Diatoms are one of the most successful eukaryotes. There are over 100,000 diatom species
contributing nearly half of total algal abundance in the oceans. Diatoms have conquered …