Extreme environments offer an unprecedented opportunity to understand microbial eukaryotic ecology, evolution, and genome biology

HB Rappaport, AM Oliverio - Nature Communications, 2023 - nature.com
Research in extreme environments has substantially expanded our understanding of the
ecology and evolution of life on Earth, but a major group of organisms has been largely …

Phylogeny and molecular evolution of the green algae

F Leliaert, DR Smith, H Moreau… - Critical reviews in …, 2012 - Taylor & Francis
The green lineage (Viridiplantae) comprises the green algae and their descendants the land
plants, and is one of the major groups of oxygenic photosynthetic eukaryotes. Current …

Characterization of the 18S rRNA gene for designing universal eukaryote specific primers

K Hadziavdic, K Lekang, A Lanzen, I Jonassen… - PloS one, 2014 - journals.plos.org
High throughput sequencing technology has great promise for biodiversity studies.
However, an underlying assumption is that the primers used in these studies are universal …

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

T Stoeck, D Bass, M Nebel, R Christen… - Molecular …, 2010 - Wiley Online Library
Sequencing of ribosomal DNA clone libraries amplified from environmental DNA has
revolutionized our understanding of microbial eukaryote diversity and ecology. The results of …

Microbial ecology of the dark ocean above, at, and below the seafloor

BN Orcutt, JB Sylvan, NJ Knab… - … and molecular biology …, 2011 - Am Soc Microbiol
The majority of life on Earth—notably, microbial life—occurs in places that do not receive
sunlight, with the habitats of the oceans being the largest of these reservoirs. Sunlight …

Marine fungi: their ecology and molecular diversity

TA Richards, MDM Jones, G Leonard… - Annual review of …, 2012 - annualreviews.org
Fungi appear to be rare in marine environments. There are relatively few marine isolates in
culture, and fungal small subunit ribosomal DNA (SSU rDNA) sequences are rarely …

Green algae and the origin of land plants

LA Lewis, RM McCourt - American journal of botany, 2004 - Wiley Online Library
Over the past two decades, molecular phylogenetic data have allowed evaluations of
hypotheses on the evolution of green algae based on vegetative morphological and …

Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits

F Lutzoni, F Kauff, CJ Cox, D McLaughlin… - American journal of …, 2004 - Wiley Online Library
Based on an overview of progress in molecular systematics of the true fungi
(Fungi/Eumycota) since 1990, little overlap was found among single‐locus data matrices …

The promise of a DNA taxonomy

ML Blaxter - … Transactions of the Royal Society of …, 2004 - royalsocietypublishing.org
Not only is the number of described species a very small proportion of the estimated extant
number of taxa, but it also appears that all concepts of the extent and boundaries of 'species' …

Microbial oceanography of the dark ocean's pelagic realm

J Arístegui, JM Gasol, CM Duarte… - Limnology and …, 2009 - Wiley Online Library
The pelagic realm of the dark ocean represents a key site for remineralization of organic
matter and long‐term carbon storage and burial in the biosphere. It contains the largest pool …