Bacterial active matter

IS Aranson - Reports on Progress in Physics, 2022 - iopscience.iop.org
Bacteria are among the oldest and most abundant species on Earth. Bacteria successfully
colonize diverse habitats and play a significant role in the oxygen, carbon, and nitrogen …

Collective hydrodynamics of swimming microorganisms: living fluids

DL Koch, G Subramanian - Annual Review of Fluid Mechanics, 2011 - annualreviews.org
Experimental observations indicate that, at sufficiently high cell densities, swimming bacteria
exhibit coordinated motions on length scales (10 to 100 μm) that are large compared with …

Swarming bacteria migrate by Lévy Walk

G Ariel, A Rabani, S Benisty, JD Partridge… - Nature …, 2015 - nature.com
Individual swimming bacteria are known to bias their random trajectories in search of food
and to optimize survival. The motion of bacteria within a swarm, wherein they migrate as a …

[HTML][HTML] High-throughput 3D tracking of bacteria on a standard phase contrast microscope

KM Taute, S Gude, SJ Tans, TS Shimizu - Nature communications, 2015 - nature.com
Bacteria employ diverse motility patterns in traversing complex three-dimensional (3D)
natural habitats. 2D microscopy misses crucial features of 3D behaviour, but the applicability …

Painting with light-powered bacteria

J Arlt, VA Martinez, A Dawson, T Pilizota… - Nature …, 2018 - nature.com
Self-assembly is a promising route for micro-and nano-fabrication with potential to
revolutionise many areas of technology, including personalised medicine. Here we …

Differential dynamic microscopy of bacterial motility

LG Wilson, VA Martinez, J Schwarz-Linek, J Tailleur… - Physical review …, 2011 - APS
We demonstrate a method for the fast, high-throughput characterization of the dynamics of
active particles. Specifically, we measure the swimming speed distribution and motile cell …

Logarithmic sensing in Escherichia coli bacterial chemotaxis

YV Kalinin, L Jiang, Y Tu, M Wu - Biophysical journal, 2009 - cell.com
We studied the response of swimming Escherichia coli (E. coli) bacteria in a comprehensive
set of well-controlled chemical concentration gradients using a newly developed microfluidic …

Mean-field models in swarm robotics: A survey

K Elamvazhuthi, S Berman - Bioinspiration & Biomimetics, 2019 - iopscience.iop.org
We present a survey on the application of fluid approximations, in the form of mean-field
models, to the design of control strategies in swarm robotics. Mean-field models that consist …

Live from under the lens: exploring microbial motility with dynamic imaging and microfluidics

K Son, DR Brumley, R Stocker - Nature Reviews Microbiology, 2015 - nature.com
Motility is one of the most dynamic features of the microbial world. The ability to swim or
crawl frequently governs how microorganisms interact with their physical and chemical …

Three-dimensional particle tracking via bifocal imaging

E Toprak, H Balci, BH Blehm, PR Selvin - Nano letters, 2007 - ACS Publications
We introduce a bifocal imaging method that enables three-dimensional (3D) tracking of both
fluorescent and nonfluorescent particles. We accomplish this by simultaneously imaging a …