Adaptive dynamical networks

R Berner, T Gross, C Kuehn, J Kurths, S Yanchuk - Physics Reports, 2023 - Elsevier
It is a fundamental challenge to understand how the function of a network is related to its
structural organization. Adaptive dynamical networks represent a broad class of systems that …

[HTML][HTML] GPUs outperform current HPC and neuromorphic solutions in terms of speed and energy when simulating a highly-connected cortical model

JC Knight, T Nowotny - Frontiers in neuroscience, 2018 - frontiersin.org
While neuromorphic systems may be the ultimate platform for deploying spiking neural
networks (SNNs), their distributed nature and optimization for specific types of models …

Long-term desynchronization by coordinated reset stimulation in a neural network model with synaptic and structural plasticity

T Manos, S Diaz-Pier, PA Tass - Frontiers in physiology, 2021 - frontiersin.org
Several brain disorders are characterized by abnormal neuronal synchronization. To
specifically counteract abnormal neuronal synchrony and, hence, related symptoms …

On evolution PDEs on co-evolving graphs

A Esposito, L Mikolás - arxiv preprint arxiv:2310.10350, 2023 - arxiv.org
We provide a well-posedness theory for a class of nonlocal continuity equations on co-
evolving graphs. We describe the connection among vertices through an edge weight …

Exploring parameter and hyper-parameter spaces of neuroscience models on high performance computers with learning to learn

A Yegenoglu, A Subramoney, T Hater… - Frontiers in …, 2022 - frontiersin.org
Neuroscience models commonly have a high number of degrees of freedom and only
specific regions within the parameter space are able to produce dynamics of interest. This …

Two-compartment neuronal spiking model expressing brain-state specific apical-amplification,-isolation and-drive regimes

E Pastorelli, A Yegenoglu, N Kolodziej, W Wybo… - arxiv preprint arxiv …, 2023 - arxiv.org
Mounting experimental evidence suggests that brain-state-specific neural mechanisms,
supported by connectomic architectures, play a crucial role in integrating past and …

[HTML][HTML] Firing rate homeostasis counteracts changes in stability of recurrent neural networks caused by synapse loss in Alzheimer's disease

C Bachmann, T Tetzlaff, R Duarte… - PLoS Computational …, 2020 - journals.plos.org
The impairment of cognitive function in Alzheimer's disease is clearly correlated to synapse
loss. However, the mechanisms underlying this correlation are only poorly understood …

A data-driven biophysical computational model of Parkinson's disease based on marmoset monkeys

CM Ranieri, JM Pimentel, MR Romano, LA Elias… - IEEE …, 2021 - ieeexplore.ieee.org
In this work we propose a new biophysical computational model of brain regions relevant to
Parkinson's Disease (PD) based on local field potential data collected from the brain of …

Insite: a pipeline enabling in-transit visualization and analysis for neuronal network simulations

M Krüger, S Oehrl, AC Demiralp, S Spreizer… - … Conference on High …, 2022 - Springer
Neuronal network simulators are central to computational neuroscience, enabling the study
of the nervous system through in-silico experiments. Through the utilization of high …

A Framework of Digital Twins for Modeling Human-Subject Word Formation Experiments

H He, X Liu, CJ Kuhlman, X Deng - 2024 Winter Simulation …, 2024 - ieeexplore.ieee.org
Agent-based models (ABMs) are used to simulate human-subject experiments. A
comprehensive understanding of these human systems often requires executing large …