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A tutorial review: Metabolomics and partial least squares-discriminant analysis–a marriage of convenience or a shotgun wedding
The predominance of partial least squares-discriminant analysis (PLS-DA) used to analyze
metabolomics datasets (indeed, it is the most well-known tool to perform classification and …
metabolomics datasets (indeed, it is the most well-known tool to perform classification and …
Navigating freely-available software tools for metabolomics analysis
Introduction The field of metabolomics has expanded greatly over the past two decades,
both as an experimental science with applications in many areas, as well as in regards to …
both as an experimental science with applications in many areas, as well as in regards to …
NOREVA: normalization and evaluation of MS-based metabolomics data
Diverse forms of unwanted signal variations in mass spectrometry-based metabolomics data
adversely affect the accuracies of metabolic profiling. A variety of normalization methods …
adversely affect the accuracies of metabolic profiling. A variety of normalization methods …
ANPELA: analysis and performance assessment of the label-free quantification workflow for metaproteomic studies
Label-free quantification (LFQ) with a specific and sequentially integrated workflow of
acquisition technique, quantification tool and processing method has emerged as the …
acquisition technique, quantification tool and processing method has emerged as the …
Recommended strategies for spectral processing and post-processing of 1D 1H-NMR data of biofluids with a particular focus on urine
Abstract 1 H NMR spectra from urine can yield information-rich data sets that offer important
insights into many biological and biochemical phenomena. However, the quality and utility …
insights into many biological and biochemical phenomena. However, the quality and utility …
[HTML][HTML] Application of metabolomics to assess milk quality and traceability
Milk is a foodstuff widely consumed around the world originating from a variety of different
species, animal management and production systems. In recent years, consumers have …
species, animal management and production systems. In recent years, consumers have …
Metabolomics of plant root exudates: From sample preparation to data analysis
Plants release a set of chemical compounds, called exudates, into the rhizosphere, under
normal conditions and in response to environmental stimuli and surrounding soil organisms …
normal conditions and in response to environmental stimuli and surrounding soil organisms …
Pharmacometabonomics: data processing and statistical analysis
J Fu, Y Zhang, J Liu, X Lian, J Tang… - Briefings in …, 2021 - academic.oup.com
Individual variations in drug efficacy, side effects and adverse drug reactions are still
challenging that cannot be ignored in drug research and development. The aim of …
challenging that cannot be ignored in drug research and development. The aim of …
Evaluating machine learning methods of analyzing multiclass metabolomics
Y Gong, W Ding, P Wang, Q Wu, X Yao… - Journal of Chemical …, 2023 - ACS Publications
Multiclass metabolomic studies have become popular for revealing the differences in
multiple stages of complex diseases, various lifestyles, or the effects of specific treatments. In …
multiple stages of complex diseases, various lifestyles, or the effects of specific treatments. In …
Data standards can boost metabolomics research, and if there is a will, there is a way
Thousands of articles using metabolomics approaches are published every year. With the
increasing amounts of data being produced, mere description of investigations as text in …
increasing amounts of data being produced, mere description of investigations as text in …