Abstract RNA-sequencing (RNA-seq) has a wide variety of applications, but no single
analysis pipeline can be used in all cases. We review all of the major steps in RNA-seq data …

Recent years have witnessed a gradual increase in the bioavailability and groundwater
leaching of toxic heavy metals (HMs) in the environment, driven mainly by anthropogenic …

Cross-talk between different types of post-translational modifications on the same protein
molecule adds specificity and combinatorial logic to signal processing, but it has not been …

We show that the antidiabetic drug metformin inhibits the expression of genes coding for
multiple inflammatory cytokines seen during cellular senescence. Conditioned medium (CM) …

Objective To demonstrate the clinical value of the endometrial receptivity array (ERA) in
patients with repeated implantation failure (RIF), for guiding their personalized embryo …

The human mitochondrial genome comprises a distinct genetic system transcribed as
precursor polycistronic transcripts that are subsequently cleaved to generate individual …

Transcriptomic analyses have identified tens of thousands of intergenic, intronic, and cis-
antisense long noncoding RNAs (lncRNAs) that are expressed from mammalian genomes …

During embryo implantation, the blastocyst interacts with and regulates the endometrium,
and endometrial fluid secreted by the endometrial epithelium nurtures the embryo. Here, we …

INTRODUCTION Crocodilians and birds are the two extant clades of archosaurs, a group
that includes the extinct dinosaurs and pterosaurs. Fossils suggest that living crocodilians …

Motivation: The widespread adoption of RNA-seq to quantitatively measure gene expression
has increased the scope of sequencing experimental designs to include time-course …