A molecular basis of tumor metastasis and current approaches to decode targeted migration-promoting events in pediatric neuroblastoma

D Corallo, M Dalla Vecchia, D Lazic… - Biochemical …, 2023 - Elsevier
Cell motility is a crucial biological process that plays a critical role in the development of
multicellular organisms and is essential for tissue formation and regeneration. However …

Recent advances in oblique plane microscopy

J Kim - Nanophotonics, 2023 - degruyter.com
Oblique plane microscopy (OPM) directly captures object information in a plane tilted from
the focal plane of the objective lens without the need for slow z-stack acquisition. This …

Resolution doubling in light-sheet microscopy via oblique plane structured illumination

B Chen, BJ Chang, P Roudot, F Zhou, E Sapoznik… - Nature …, 2022 - nature.com
Structured illumination microscopy (SIM) doubles the spatial resolution of a fluorescence
microscope without requiring high laser powers or specialized fluorophores. However, the …

Blazed oblique plane microscopy reveals scale-invariant inference of brain-wide population activity

M Hoffmann, J Henninger, J Veith, L Richter… - Nature …, 2023 - nature.com
Due to the size and opacity of vertebrate brains, it has until now been impossible to
simultaneously record neuronal activity at cellular resolution across the entire adult brain. As …

A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues

AK Glaser, KW Bishop, LA Barner, EA Susaki… - Nature …, 2022 - nature.com
Light-sheet microscopy has emerged as the preferred means for high-throughput volumetric
imaging of cleared tissues. However, there is a need for a flexible system that can address …

Image processing tools for petabyte-scale light sheet microscopy data

X Ruan, M Mueller, G Liu, F Görlitz, TM Fu, DE Milkie… - Nature …, 2024 - nature.com
Light sheet microscopy is a powerful technique for high-speed three-dimensional imaging of
subcellular dynamics and large biological specimens. However, it often generates datasets …

Zebrahub–Multimodal zebrafish developmental atlas reveals the State-transition dynamics of late-vertebrate pluripotent axial progenitors

M Lange, A Granados, S VijayKumar, J Bragantini… - BioRxiv, 2023 - biorxiv.org
Elucidating the developmental processes of organisms requires a comprehensive
understanding of cellular lineages in the spatial, temporal, and molecular domains. In this …

Engineering the future of 3D pathology

JTC Liu, SSL Chow, R Colling… - The Journal of …, 2024 - Wiley Online Library
In recent years, technological advances in tissue preparation, high‐throughput volumetric
microscopy, and computational infrastructure have enabled rapid developments in …

Large-scale multi-hypotheses cell tracking using ultrametric contours maps

J Bragantini, M Lange, L Royer - European Conference on Computer …, 2024 - Springer
In this work, we describe a method for large-scale 3D cell-tracking through a segmentation
selection approach. The proposed method is effective at tracking cells across large …

A multimodal zebrafish developmental atlas reveals the state-transition dynamics of late-vertebrate pluripotent axial progenitors

M Lange, A Granados, S VijayKumar, J Bragantini… - Cell, 2024 - cell.com
Elucidating organismal developmental processes requires a comprehensive understanding
of cellular lineages in the spatial, temporal, and molecular domains. In this study, we …