Artificial channels for confined mass transport at the sub-nanometre scale

J Shen, G Liu, Y Han, W ** - Nature Reviews Materials, 2021 - nature.com
Mass transport at the sub-nanometre scale, including selective transport of gases, liquids
and ions, plays a key role in systems such as catalysis, energy generation and storage …

[HTML][HTML] Classical and reactive molecular dynamics: Principles and applications in combustion and energy systems

Q Mao, M Feng, XZ Jiang, Y Ren, KH Luo… - Progress in Energy and …, 2023 - Elsevier
Molecular dynamics (MD) has evolved into a ubiquitous, versatile and powerful
computational method for fundamental research in science branches such as biology …

Selective membranes in water and wastewater treatment: Role of advanced materials

K Zuo, K Wang, RM DuChanois, Q Fang, EM Deemer… - Materials Today, 2021 - Elsevier
Membrane separation has enjoyed tremendous advances in relevant material and
engineering sciences, making it the fastest growing technology in water treatment. Although …

Materials for next-generation desalination and water purification membranes

JR Werber, CO Osuji, M Elimelech - Nature Reviews Materials, 2016 - nature.com
Membrane-based separations for water purification and desalination have been
increasingly applied to address the global challenges of water scarcity and the pollution of …

2D MXene nanofilms with tunable gas transport channels

J Shen, G Liu, Y Ji, Q Liu, L Cheng… - Advanced Functional …, 2018 - Wiley Online Library
Abstract 2D materials' membranes with well‐defined nanochannels are promising for
precise molecular separation. Herein, the design and engineering of atomically thin 2D …

Water in nanopores and biological channels: a molecular simulation perspective

CI Lynch, S Rao, MSP Sansom - Chemical reviews, 2020 - ACS Publications
This Review explores the dynamic behavior of water within nanopores and biological
channels in lipid bilayer membranes. We focus on molecular simulation studies, alongside …

CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures

E Chovancova, A Pavelka, P Benes, O Strnad… - 2012 - journals.plos.org
Tunnels and channels facilitate the transport of small molecules, ions and water solvent in a
large variety of proteins. Characteristics of individual transport pathways, including their …

Mesophyll diffusion conductance to CO2: an unappreciated central player in photosynthesis

J Flexas, MM Barbour, O Brendel, HM Cabrera… - Plant Science, 2012 - Elsevier
Mesophyll diffusion conductance to CO2 is a key photosynthetic trait that has been studied
intensively in the past years. The intention of the present review is to update knowledge of …

Enhanced sampling in molecular dynamics using metadynamics, replica-exchange, and temperature-acceleration

C Abrams, G Bussi - Entropy, 2013 - mdpi.com
We review a selection of methods for performing enhanced sampling in molecular dynamics
simulations. We consider methods based on collective variable biasing and on tempering …

Long-timescale molecular dynamics simulations of protein structure and function

JL Klepeis, K Lindorff-Larsen, RO Dror… - Current opinion in …, 2009 - Elsevier
Molecular dynamics simulations allow for atomic-level characterization of biomolecular
processes such as the conformational transitions associated with protein function. The …