Mechanisms of substrate processing during ER-associated protein degradation

JC Christianson, E Jarosch, T Sommer - Nature Reviews Molecular Cell …, 2023 - nature.com
Maintaining proteome integrity is essential for long-term viability of all organisms and is
overseen by intrinsic quality control mechanisms. The secretory pathway of eukaryotes …

Protein quality control in the secretory pathway

Z Sun, JL Brodsky - Journal of Cell Biology, 2019 - rupress.org
Protein folding is inherently error prone, especially in the endoplasmic reticulum (ER). Even
with an elaborate network of molecular chaperones and protein folding facilitators …

Ubiquitin-like protein conjugation: structures, chemistry, and mechanism

L Cappadocia, CD Lima - Chemical reviews, 2018 - ACS Publications
Ubiquitin-like proteins (Ubl's) are conjugated to target proteins or lipids to regulate their
activity, stability, subcellular localization, or macromolecular interactions. Similar to ubiquitin …

Structural insights into the catalysis and regulation of E3 ubiquitin ligases

L Buetow, DT Huang - Nature reviews Molecular cell biology, 2016 - nature.com
Covalent attachment (conjugation) of one or more ubiquitin molecules to protein substrates
governs numerous eukaryotic cellular processes, including apoptosis, cell division and …

E2 enzymes: more than just middle men

MD Stewart, T Ritterhoff, RE Klevit, PS Brzovic - Cell research, 2016 - nature.com
Ubiquitin-conjugating enzymes (E2s) are the central players in the trio of enzymes
responsible for the attachment of ubiquitin (Ub) to cellular proteins. Humans have∼ 40 E2s …

Structural diversity of ubiquitin E3 ligase

S Toma-Fukai, T Shimizu - Molecules, 2021 - mdpi.com
The post-translational modification of proteins regulates many biological processes. Their
dysfunction relates to diseases. Ubiquitination is one of the post-translational modifications …

New insights into ubiquitin E3 ligase mechanism

CE Berndsen, C Wolberger - Nature structural & molecular biology, 2014 - nature.com
E3 ligases carry out the final step in the ubiquitination cascade, catalyzing transfer of
ubiquitin from an E2 enzyme to form a covalent bond with a substrate lysine. Three distinct …

Structural insights into Ubr1-mediated N-degron polyubiquitination

M Pan, Q Zheng, T Wang, L Liang, J Mao, C Zuo… - Nature, 2021 - nature.com
The N-degron pathway targets proteins that bear a destabilizing residue at the N terminus
for proteasome-dependent degradation. In yeast, Ubr1—a single-subunit E3 ligase—is …

[HTML][HTML] RING-type E3 ligases: master manipulators of E2 ubiquitin-conjugating enzymes and ubiquitination

MB Metzger, JN Pruneda, RE Klevit… - Biochimica et Biophysica …, 2014 - Elsevier
RING finger domain and RING finger-like ubiquitin ligases (E3s), such as U-box proteins,
constitute the vast majority of known E3s. RING-type E3s function together with ubiquitin …

[HTML][HTML] Protein quality control and elimination of protein waste: The role of the ubiquitin–proteasome system

I Amm, T Sommer, DH Wolf - … et Biophysica Acta (BBA)-Molecular Cell …, 2014 - Elsevier
Mistakes are part of our world and constantly occurring. Due to transcriptional and
translational failures, genomic mutations or diverse stress conditions like oxidation or heat …